DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and Tollo

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster


Alignment Length:185 Identity:36/185 - (19%)
Similarity:79/185 - (42%) Gaps:33/185 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   411 KHEAIAKNVHDLLAKLAWDFSADQ------LDYLFRCFQTSMQKSASRKQRERLLELNRRL--AE 467
            :||.:.:|...||.:|......|:      ::.|.|  ..|...|:|.::.|...|..:::  .|
  Fly    71 EHEEVKENKITLLEELQEKTEEDEENKPSVIEKLHR--SNSSSSSSSDEEGEEKKEKKKKIVEGE 133

  Fly   468 DDKNGMMAQKVLNMF---------WNLAHSSDTPLEVLEQALQSHVKILDYSCSQERDAQKSIWL 523
            :||.|:: :|:....         .::..|:..|:.|.|       .::::...:|   :|...:
  Fly   134 EDKKGLV-EKIKEKLPGHHDKTAEDDVPVSTTIPVPVSE-------SVVEHDHPEE---EKKGLV 187

  Fly   524 VKCVEELKG-RDEWV--LPALRLIRDICSLYDTTPNHTPRIQHTMNRQKIIDQLQ 575
            .|..|:|.| .||..  .||:.....:.:.:...|.....::|...::.|:::::
  Fly   188 EKIKEKLPGHHDEKAEDSPAVTSTPLVVTEHPVEPTTELPVEHPEEKKGILEKIK 242

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 36/185 (19%)
leucine-rich repeat 339..365 CDD:275380
leucine-rich repeat 366..388 CDD:275380