DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and CG16974

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_609610.2 Gene:CG16974 / 34713 FlyBaseID:FBgn0032479 Length:1257 Species:Drosophila melanogaster


Alignment Length:1023 Identity:226/1023 - (22%)
Similarity:332/1023 - (32%) Gaps:376/1023 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 LVTMDLSSNLLTVFPQQLFEQLPELRIVSLRDNLIRSVQWKELQVRPLRMH-------------- 338
            |.|...:...|...|||   ..|::|      ..||:.|..|..:...:.|              
  Fly    32 LATYSSAEAYLAQIPQQ---HRPQIR------PRIRTWQEHEFSLLGYKFHLPFVGHAVDSDLDD 87

  Fly   339 --------LERLDLGQNCIENLE------------SDYFQQNYSDVHLRALNLEQNFVTQLPEAV 383
                    |:..|.|...:|..|            .:.|:.|...|.||.:|  |..::|....:
  Fly    88 SDSDEGLWLDAADAGSESVEVEEHELPSVGHVDPTGNVFKLNCEHVDLRRVN--QELLSQRSSHI 150

  Fly   384 FKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRL---------TTVPVALSSLHHLKY 439
                ....|:||.....|.:|.....| |:|.....:.:.|         |..|   .|..:::.
  Fly   151 ----NYNQLMLAHVPADRSNPLKLPQL-ESLREFSWQSSELKDETLMELFTRQP---RSFEYMER 207

  Fly   440 LYLTSNQISQLN-NLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGYNSITDIPEGIFA 503
            |.|..|::..|: .:|.....::||.:|||..|           ..|.||:.|            
  Fly   208 LNLAENRLECLHWAIPLAVRRVKVLEMSGNRLS-----------NCSLLNLQY------------ 249

  Fly   504 VDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENVSRTLKILELSFA 568
                                        ::|:||:.|..:::|                      
  Fly   250 ----------------------------MKQLQELHLDRSELT---------------------- 264

  Fly   569 VFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQ 633
            ..|.|.|..         ||:|..|.|..|.|.::..:.|....:|..:.||.|:|..||..|||
  Fly   265 YLPQRFLGE---------LSELRMLNLSQNLLTELPRDIFVGALKLERLYLSGNRLSVLPFMLFQ 320

  Fly   634 SDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRL 698
            :.|  .|..:|||.|.|.......|...|.|:.|:||.|:|::|.:|:.::|..||.||||.|.|
  Fly   321 TAA--DLQVLDLSDNRLLSFPDNFFARNGQLRQLHLQRNQLKSIGKHSLYSLRELRQLDLSQNSL 383

  Fly   699 VNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIY 763
            ..|...||..|.:|.|                                                 
  Fly   384 SVIDRKAFESLDHLLA------------------------------------------------- 399

  Fly   764 QLDISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQ 828
                                                            |||:.||||.|....||
  Fly   400 ------------------------------------------------LNVSGNNLTLLSSIIFQ 416

  Fly   829 GLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVW 893
            .|::|::||||.||..||....|...|.|.:|||:..     |.|.|.|               |
  Fly   417 SLHALRQLDLSRNQFKQLPSGLFQRQRSLVLLRIDET-----PIEQFSN---------------W 461

  Fly   894 PVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDL 958
                            :|.                 ||.||...::          |:.|..|.:
  Fly   462 ----------------ISR-----------------YDESLVDPQV----------LHRLRYLSV 483

  Fly   959 SQNPLVTTNLREVFVHTPRLRKLSLHHMGLYVLPP--LKLPLLSYLDVSGNYLQEL-SPLGSLRH 1020
            .||..:|.....:|.:||.:|:|.|...||..||.  ..|..|..|.|.||.|..| ..:..||.
  Fly   484 QQNRKLTYLPATLFANTPNIRELLLAENGLLQLPTQISGLSRLQRLSVRGNSLGSLPENIKELRQ 548

  Fly  1021 LRHVNVSHNK-------------LTNASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLAEL 1072
            |.::|:..|:             |.|.|.:..|..|..:  :.::....:..|....|:.|    
  Fly   549 LHYLNILGNEYQCDCSMYWLTAWLANTSTSLRHQMPQAQ--NHSNGSTNQTPLDSYESIDH---- 607

  Fly  1073 NILDVKVTNPQAFSKLRSLRKLHASSHANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTK 1137
            .|..:|.........||.|.||:.|           :|.:.|..    ||.:     .||.:..|
  Fly   608 QIDALKCQYGYRGDMLRVLSKLNCS-----------VPTVVQFS----EPKM-----HKLLSTAK 652

  Fly  1138 IRLLELYGSNVQTIAPDVFTGLSRSQRLQVKISHTRISDLPPGIFYALREVPHLSIDISHNRINA 1202
            :. .::.||.|    ||:.....|::.|:    |....|..|.|..:..:        :|...:|
  Fly   653 LE-CQISGSPV----PDIIWVTPRNKILR----HHADPDKRPIIIDSKED--------AHQPPSA 700

  Fly  1203 --LAA--DSFYPNKSYW----DAVGTRSIM--GGLITSHNPLECECGL 1240
              |||  |..|.....|    ..||.|.::  .|.:..||....:.||
  Fly   701 QELAALMDESYIQSLNWTRQNSLVGRRVVLVENGSLLVHNISRIDSGL 748

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268 17/86 (20%)
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380 6/22 (27%)
leucine-rich repeat 312..338 CDD:275380 5/25 (20%)
LRR <338..651 CDD:443914 73/356 (21%)
leucine-rich repeat 339..365 CDD:275380 7/37 (19%)
leucine-rich repeat 366..388 CDD:275380 5/21 (24%)
leucine-rich repeat 389..412 CDD:275380 6/22 (27%)
leucine-rich repeat 414..436 CDD:275380 5/30 (17%)
leucine-rich repeat 437..459 CDD:275380 5/22 (23%)
leucine-rich repeat 460..483 CDD:275380 6/22 (27%)
leucine-rich repeat 484..510 CDD:275380 4/25 (16%)
leucine-rich repeat 511..534 CDD:275380 0/22 (0%)
leucine-rich repeat 535..589 CDD:275380 8/53 (15%)
LRR 543..971 CDD:443914 96/427 (22%)
leucine-rich repeat 590..613 CDD:275380 6/22 (27%)
leucine-rich repeat 614..639 CDD:275380 11/24 (46%)
leucine-rich repeat 640..663 CDD:275380 7/22 (32%)
leucine-rich repeat 664..687 CDD:275380 9/22 (41%)
leucine-rich repeat 688..711 CDD:275380 12/22 (55%)
leucine-rich repeat 712..735 CDD:275380 2/22 (9%)
leucine-rich repeat 740..783 CDD:275380 0/42 (0%)
leucine-rich repeat 785..808 CDD:275380 0/22 (0%)
leucine-rich repeat 809..832 CDD:275380 11/22 (50%)
leucine-rich repeat 833..856 CDD:275380 10/22 (45%)
leucine-rich repeat 857..879 CDD:275380 8/21 (38%)
leucine-rich repeat 880..900 CDD:275380 1/19 (5%)
leucine-rich repeat 905..928 CDD:275380 1/22 (5%)
LRR 911..>1203 CDD:443914 70/309 (23%)
leucine-rich repeat 929..952 CDD:275380 5/22 (23%)
leucine-rich repeat 953..977 CDD:275380 7/23 (30%)
leucine-rich repeat 978..1020 CDD:275380 16/44 (36%)
leucine-rich repeat 1045..1068 CDD:275380 2/22 (9%)
leucine-rich repeat 1069..1090 CDD:275380 3/20 (15%)
leucine-rich repeat 1091..1114 CDD:275380 5/22 (23%)
leucine-rich repeat 1115..1161 CDD:275380 10/45 (22%)
leucine-rich repeat 1162..1190 CDD:275380 5/27 (19%)
PCC 1230..>1298 CDD:188093 4/11 (36%)
CG16974NP_609610.2 leucine-rich repeat 206..228 CDD:275380 5/21 (24%)
leucine-rich repeat 229..252 CDD:275380 10/73 (14%)
LRR <230..531 CDD:443914 123/544 (23%)
leucine-rich repeat 253..276 CDD:275380 8/53 (15%)
leucine-rich repeat 277..300 CDD:275380 6/22 (27%)
leucine-rich repeat 301..324 CDD:275380 11/24 (46%)
leucine-rich repeat 325..348 CDD:275380 7/22 (32%)
leucine-rich repeat 349..372 CDD:275380 9/22 (41%)
leucine-rich repeat 373..396 CDD:275380 12/22 (55%)
leucine-rich repeat 397..420 CDD:275380 13/119 (11%)
leucine-rich repeat 421..444 CDD:275380 10/22 (45%)
leucine-rich repeat 478..502 CDD:275380 7/23 (30%)
leucine-rich repeat 503..526 CDD:275380 8/22 (36%)
Ig <714..761 CDD:472250 9/35 (26%)
Ig strand C 714..718 CDD:409358 0/3 (0%)
Ig strand E 734..738 CDD:409358 1/3 (33%)
Ig strand F 748..753 CDD:409358 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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