DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and pan-1

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_497925.1 Gene:pan-1 / 175596 WormBaseID:WBGene00003915 Length:594 Species:Caenorhabditis elegans


Alignment Length:600 Identity:132/600 - (22%)
Similarity:226/600 - (37%) Gaps:193/600 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 NESFAQMR--ELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSL-GDLQT 666
            :|:.|.:.  ||..:.:..:.:..||:.||:   :....::.|...||..|:..:|.|| |..:.
 Worm    70 SENLASLNGTELGRLTIRDSTVNVLPQDLFE---NVFAKQVKLERCGLSTLQPNSFQSLGGSAEL 131

  Fly   667 LNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFL 731
            |:|:.||::.:.:..|..|:.|:.|||:.|::..|..|||..|..:..|.|..|.:         
 Worm   132 LSLRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVEELLLNENDI--------- 187

  Fly   732 YVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNLAHNQLG 796
                                                   .|.|:.:|..:.|             
 Worm   188 ---------------------------------------RVLKTGTFDGMKN------------- 200

  Fly   797 SLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILR 861
                        |:.|.:.:.||..:::.:|:|||||::|.||:|.|:.:....||.|:.||:|.
 Worm   201 ------------LKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIFSALKNLRVLD 253

  Fly   862 INSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQM-----------SHNNL 915
            :.||::..:..:.|  .:||.|.:..|.:.            :::||::           ..|.:
 Worm   254 LGSNKISNVEMKSF--PKLEKLVLNNNTID------------SMKSIKLKDLPSLVVALFDRNKI 304

  Fly   916 EYL-DASMF--INSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLREVFVHTPR 977
            |.: |..||  ..|..:..:|||||.::.:....|....||..|.|..|     .:.|:..|:| 
 Worm   305 ESIGDMDMFGLTRSDRIETLSLARNNLSQISPKAFQHTPNLITLLLQYN-----QIEELSSHSP- 363

  Fly   978 LRKLSLHHMGLYVLPPLKLPLLSYLDVSGNYLQELSPLGSLRHLRHVNVSHNKLTNASCAAEHLP 1042
                          ..::.|.|:                ||:.|..:.:|.|.|  :...::.||
 Worm   364 --------------SQVRTPFLA----------------SLKKLVTLQLSSNNL--SVIRSDELP 396

  Fly  1043 PSVRVLDLAHNPLRRITLHDLASLR------HLAELNIL----------------DVKV------ 1079
            .|:..|.|.||.:.:|....|..:.      |..:||.|                ||.:      
 Worm   397 KSLSSLALDHNVISKIEARALEGMEIKRLYLHSNKLNYLYQGTFDSFSPKSVEAVDVSLNPWVCV 461

  Fly  1080 -TNPQAFSKLRSLRKLHASSHANLGEIVARIPGLQQLRVHCLE-PNIGQQLFAKLANNTKIRLLE 1142
             .:|:.:..    |.|.||..|::.|..          :.||. ||.||    |..:.......|
 Worm   462 CNDPKEWLP----RWLEASEEADVAEGA----------LGCLAIPNCGQ----KEGSTVMPEEEE 508

  Fly  1143 LYGSNVQTIAPDVFT 1157
            :|.|...|:|..:.|
 Worm   509 VYRSGWITVAATILT 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 10/47 (21%)
leucine-rich repeat 339..365 CDD:275380
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
leucine-rich repeat 414..436 CDD:275380
leucine-rich repeat 437..459 CDD:275380
leucine-rich repeat 460..483 CDD:275380
leucine-rich repeat 484..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
leucine-rich repeat 535..589 CDD:275380
LRR 543..971 CDD:443914 86/382 (23%)
leucine-rich repeat 590..613 CDD:275380 2/9 (22%)
leucine-rich repeat 614..639 CDD:275380 5/24 (21%)
leucine-rich repeat 640..663 CDD:275380 7/23 (30%)
leucine-rich repeat 664..687 CDD:275380 6/22 (27%)
leucine-rich repeat 688..711 CDD:275380 10/22 (45%)
leucine-rich repeat 712..735 CDD:275380 3/22 (14%)
leucine-rich repeat 740..783 CDD:275380 3/42 (7%)
leucine-rich repeat 785..808 CDD:275380 0/22 (0%)
leucine-rich repeat 809..832 CDD:275380 7/22 (32%)
leucine-rich repeat 833..856 CDD:275380 9/22 (41%)
leucine-rich repeat 857..879 CDD:275380 6/21 (29%)
leucine-rich repeat 880..900 CDD:275380 4/19 (21%)
leucine-rich repeat 905..928 CDD:275380 8/36 (22%)
LRR 911..>1203 CDD:443914 62/279 (22%)
leucine-rich repeat 929..952 CDD:275380 6/22 (27%)
leucine-rich repeat 953..977 CDD:275380 6/23 (26%)
leucine-rich repeat 978..1020 CDD:275380 4/41 (10%)
leucine-rich repeat 1045..1068 CDD:275380 6/28 (21%)
leucine-rich repeat 1069..1090 CDD:275380 6/43 (14%)
leucine-rich repeat 1091..1114 CDD:275380 6/22 (27%)
leucine-rich repeat 1115..1161 CDD:275380 12/43 (28%)
leucine-rich repeat 1162..1190 CDD:275380
PCC 1230..>1298 CDD:188093
pan-1NP_497925.1 leucine-rich repeat 81..104 CDD:275380 5/25 (20%)
leucine-rich repeat 105..128 CDD:275380 7/22 (32%)
leucine-rich repeat 130..152 CDD:275380 6/21 (29%)
LRR_8 132..187 CDD:404697 19/54 (35%)
leucine-rich repeat 153..176 CDD:275380 10/22 (45%)
LRR 163..>418 CDD:443914 78/379 (21%)
leucine-rich repeat 177..200 CDD:275380 6/70 (9%)
leucine-rich repeat 201..224 CDD:275380 7/22 (32%)
leucine-rich repeat 225..248 CDD:275380 9/22 (41%)
leucine-rich repeat 249..269 CDD:275380 6/21 (29%)
leucine-rich repeat 270..293 CDD:275380 6/34 (18%)
leucine-rich repeat 294..320 CDD:275380 6/25 (24%)
leucine-rich repeat 321..344 CDD:275380 6/22 (27%)
leucine-rich repeat 377..398 CDD:275380 6/22 (27%)
leucine-rich repeat 399..420 CDD:275380 6/20 (30%)
leucine-rich repeat 423..442 CDD:275380 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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