DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and egg-6

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:NP_492348.1 Gene:egg-6 / 172670 WormBaseID:WBGene00010621 Length:961 Species:Caenorhabditis elegans


Alignment Length:1145 Identity:231/1145 - (20%)
Similarity:383/1145 - (33%) Gaps:421/1145 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 ALLGSQQQDILYACP-LNSMCQCAGLPNETSTLIEINCNEVALYKFPEFMHSSVRYIEMSNTHLQ 110
            |.|.|.:    ..|| :...|.|    ..:.::|.::||...:....:.:.:|    ::...|:.
 Worm    14 AFLSSAE----ITCPRIPEKCDC----KISKSMIILSCNGEDVKTIAQTVGTS----QIDELHIL 66

  Fly   111 S-----VDDETFQGLRLKTLKLIDNELQDISERSFSTMTHSLMTLDISGNKMQHLPLDALQRLHS 170
            :     ::...|.|||  |:.::::.||..|..::..:..::..:.|:||:::.:|         
 Worm    67 NGTDVKIESLPFNGLR--TIAILNSTLQSFSPTAWRHVEATIEHITINGNELKTVP--------- 120

  Fly   171 LSRLVAQRNHITTLDGNWDAQHDTLRSLHLSDNDITEVAPGGGSIEVVSQNDNSSQPSSLAAVQT 235
                         :.||.    .||.|::|:.|.|:.:.            |.:....| |..|.
 Worm   121 -------------VFGNL----STLMSMNLNSNQISSIP------------DKAFNGLS-ALTQL 155

  Fly   236 RLETSNSI--YPPSPSSGDRTTGGRPFEQLQKLLWLDLSNNRIYHVAGNYLPRSLVTMDLSSNLL 298
            ||| :|:|  :||..                    ||.            :..|||.:|:|.|.|
 Worm   156 RLE-NNAICDFPPKS--------------------LDA------------VKASLVLLDVSGNCL 187

  Fly   299 TVFPQQLFEQLPELRIVSLRDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSD 363
            ...|.|:......|..:.|..|.|..:...||...|.                            
 Worm   188 DAIPAQILRNAANLMYLDLGSNNISEINNFELMNLPF---------------------------- 224

  Fly   364 VHLRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVP 428
              ||.|.::.                       |.:.|:||.||                 ..||
 Worm   225 --LRELRVQN-----------------------NTLRRIHPMAF-----------------MNVP 247

  Fly   429 VALSSLHHLKYLYLTSNQISQL--NNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSYLNMGY 491
                   .|:||||..|.||.|  |.|..| :||.||.:|.|....:|                 
 Worm   248 -------QLQYLYLQDNIISTLDGNRLQGF-KNLEVLDVSNNALYALP----------------- 287

  Fly   492 NSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPLVFENV 556
             |:.|:|           ||:.:.:..|.||           :|:.::.|.|             
 Worm   288 -SLKDLP-----------NLKQVRVDGNLIT-----------KIETLAFSNN------------- 316

  Fly   557 SRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSF 621
                                         |..|||  .:.|||:.|:|..||..:.:|..:.:..
 Worm   317 -----------------------------PNLQLI--SVQNNNIVQISRNSFESLDKLVVLLVGN 350

  Fly   622 NQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLE 686
            |.|..:.||:|  |...:|.::.:..|.|..|:|.:|..|..|.||:|..|::..|....|..|.
 Worm   351 NSLAKIERGMF--DGMKNLQQLSIRNNTLTALDASSFAQLAHLTTLDLGHNKIHDIEEGTFDKLS 413

  Fly   687 FLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQL-CSLSLKSFLYVSNTTTPLRLNVSHNHIA 750
            .|.:||||.|::.......|.  ..::.:.|..||| |..|...||      |.|..|.....: 
 Worm   414 KLFWLDLSNNKISGFKTSVFK--KKISNILLDGNQLICDESFNEFL------TYLIANKVRTFL- 469

  Fly   751 SFYDEL-----SSYMYIYQLDISHNHVTKSDSFTNLANTLRFLNL--AHNQLGSLQSH--AFGDL 806
            .|..|:     ..|..:...|:......::     |:...|.|.:  ..||...|.|.  :.|.|
 Worm   470 PFQQEIMCHGPEKYAGVRLKDLMMKKANET-----LSEGSRLLGVPQGSNQHSLLSSFLPSLGPL 529

  Fly   807 EFLE--------ILNVAHNNLTSLRR-RSF-------QGLNSLQELDLSHNQLDQLQVEQF---- 851
            ..|.        ::|...|.:.:||. ..|       .|.:|:...:|:.      .:|.|    
 Worm   530 GTLNGAGGAAIPLVNTLTNTIPALRSIPGFGGNIPVGTGASSVPNKNLND------AIEGFTGPL 588

  Fly   852 -----------SNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTL 905
                       |::.:|         :|::|..| :|                 ||.|.||..: 
 Worm   589 VRFATGGQPVASDIEQL---------IRSIPNMV-VN-----------------VPGFGDIDLS- 625

  Fly   906 RSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLSQNPLVTTNLRE 970
               :|....::|:     :|...:..|..|  .:..:...|.:.::.....:|:.||:....   
 Worm   626 ---KMDPTMIQYV-----LNGGQIPGIDKA--TLDKIVKQTMNKMHTAAAANLAGNPVEGQE--- 677

  Fly   971 VFVHTPRLRKLSLHHMGLYVLPPL-KLPLLSYLDVSGNYLQELS--PLGSLRH------------ 1020
                              .||||| |||       ||...|.:|  ||..|..            
 Worm   678 ------------------KVLPPLDKLP-------SGLVTQVMSGEPLPGLNENQTKIIMEYYTH 717

  Fly  1021 ---------LRHV----NVSHNKLTNASC--AAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLA 1070
                     .|.|    |.:.|.:.|.:.  ..:.|||...:..:....:..:|..::..:|.|.
 Worm   718 QMPGMDGIPARPVESQGNTTANNMFNPAMFDLLKMLPPGYNLSKIPMEVIAAVTRGEVPDMRLLP 782

  Fly  1071 ELNILDVKVTNPQAFSKLRSLRKLHASSHANLGEIVARIP 1110
            |    |:.....|..:.|.|:.....:.:.::.||:.::|
 Worm   783 E----DLLEHFKQHTTSLTSMFAGATAKNISIEEILEKLP 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268 54/290 (19%)
leucine-rich repeat 99..118 CDD:275380 1/23 (4%)
leucine-rich repeat 122..146 CDD:275380 4/23 (17%)
leucine-rich repeat 147..170 CDD:275380 4/22 (18%)
leucine-rich repeat 171..194 CDD:275380 2/22 (9%)
leucine-rich repeat 195..214 CDD:275380 5/18 (28%)
leucine-rich repeat 215..236 CDD:275380 4/20 (20%)
leucine-rich repeat 266..287 CDD:275380 2/20 (10%)
leucine-rich repeat 288..311 CDD:275380 8/22 (36%)
leucine-rich repeat 312..338 CDD:275380 7/25 (28%)
LRR <338..651 CDD:443914 61/314 (19%)
leucine-rich repeat 339..365 CDD:275380 0/25 (0%)
leucine-rich repeat 366..388 CDD:275380 3/21 (14%)
leucine-rich repeat 389..412 CDD:275380 6/22 (27%)
leucine-rich repeat 414..436 CDD:275380 2/21 (10%)
leucine-rich repeat 437..459 CDD:275380 12/23 (52%)
leucine-rich repeat 460..483 CDD:275380 6/22 (27%)
leucine-rich repeat 484..510 CDD:275380 3/25 (12%)
leucine-rich repeat 511..534 CDD:275380 4/22 (18%)
leucine-rich repeat 535..589 CDD:275380 4/53 (8%)
LRR 543..971 CDD:443914 96/468 (21%)
leucine-rich repeat 590..613 CDD:275380 9/22 (41%)
leucine-rich repeat 614..639 CDD:275380 7/24 (29%)
leucine-rich repeat 640..663 CDD:275380 7/22 (32%)
leucine-rich repeat 664..687 CDD:275380 8/22 (36%)
leucine-rich repeat 688..711 CDD:275380 7/22 (32%)
leucine-rich repeat 712..735 CDD:275380 8/23 (35%)
leucine-rich repeat 740..783 CDD:275380 7/47 (15%)
leucine-rich repeat 785..808 CDD:275380 8/26 (31%)
leucine-rich repeat 809..832 CDD:275380 7/38 (18%)
leucine-rich repeat 833..856 CDD:275380 4/37 (11%)
leucine-rich repeat 857..879 CDD:275380 5/21 (24%)
leucine-rich repeat 880..900 CDD:275380 3/19 (16%)
leucine-rich repeat 905..928 CDD:275380 3/22 (14%)
LRR 911..>1203 CDD:443914 42/230 (18%)
leucine-rich repeat 929..952 CDD:275380 3/22 (14%)
leucine-rich repeat 953..977 CDD:275380 3/23 (13%)
leucine-rich repeat 978..1020 CDD:275380 15/44 (34%)
leucine-rich repeat 1045..1068 CDD:275380 1/22 (5%)
leucine-rich repeat 1069..1090 CDD:275380 5/20 (25%)
leucine-rich repeat 1091..1114 CDD:275380 3/20 (15%)
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
PCC 1230..>1298 CDD:188093
egg-6NP_492348.1 leucine-rich repeat 107..127 CDD:275380 6/45 (13%)
LRR 128..>457 CDD:443914 121/540 (22%)
leucine-rich repeat 128..151 CDD:275380 7/35 (20%)
leucine-rich repeat 152..200 CDD:275380 19/80 (24%)
leucine-rich repeat 201..224 CDD:275380 6/22 (27%)
leucine-rich repeat 225..248 CDD:275380 11/69 (16%)
leucine-rich repeat 249..272 CDD:275380 12/23 (52%)
leucine-rich repeat 273..294 CDD:275380 9/49 (18%)
leucine-rich repeat 295..318 CDD:275380 7/75 (9%)
leucine-rich repeat 319..342 CDD:275380 10/24 (42%)
leucine-rich repeat 343..366 CDD:275380 7/24 (29%)
leucine-rich repeat 367..390 CDD:275380 7/22 (32%)
leucine-rich repeat 391..414 CDD:275380 8/22 (36%)
leucine-rich repeat 415..434 CDD:275380 6/18 (33%)
leucine-rich repeat 437..449 CDD:275378 4/11 (36%)
Blue background indicates that the domain is not in the aligned region.

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