DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and Rxfp2

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_011239323.1 Gene:Rxfp2 / 140498 MGIID:2153463 Length:740 Species:Mus musculus


Alignment Length:321 Identity:99/321 - (30%)
Similarity:151/321 - (47%) Gaps:35/321 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 NRLTTVPVALSSLHHLKYLYLTSNQI----SQLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYT 482
            |::|.......| .:.::.|...|::    :.|..:|..:.|:.:|||..|....:||.....||
Mouse    84 NKVTLTQECFLS-QYPQHCYCRENELECVKADLKAVPKVSSNVTLLSLKKNKIHRLPVKVFSRYT 147

  Fly   483 QLSYLNMGYNSITDIPEGIFAVDSWG-SNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDIT 546
            :|..:.:.:|.||.|....|.    | .|||.:.|.:|.||.|..|.|..|.|:..:.|..|.||
Mouse   148 ELRKIYLQHNCITHISRRAFL----GLHNLQILYLSHNCITSLRPGIFKDLHQLAWLILDDNPIT 208

  Fly   547 IHHPLVFENVSRT--LKILELSFAVFPARSLESL-DPLDALLPLSQLIWLGLDNNNLKQVSNESF 608
                    .:|:.  :.:..|.|.......||:| :.|.|.:|  ||.|:.|.||.:|.::|.:|
Mouse   209 --------RISQKSFMGLNSLFFLSMVGNRLEALPETLCAQMP--QLNWVDLANNGIKYITNSTF 263

  Fly   609 AQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNR 673
            .....|:.:.|..||:..:|...|.|  ..:|.|:|||.|.:.:|....|..|..||.|||.||.
Mouse   264 LTCDSLTVLFLPRNQIGFVPEKTFSS--LKNLGELDLSSNMITKLPVHLFSDLHLLQKLNLSSNP 326

  Fly   674 LRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVS 734
            |..:.::.|.:|:.|:.|||....:.|||.|.|..:.||:          .:.||:|.|.|
Mouse   327 LLYVHKNQFGSLKQLQSLDLERIEIPNISTGMFQPMKNLS----------HIYLKTFRYCS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 70/236 (30%)
leucine-rich repeat 339..365 CDD:275380
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
leucine-rich repeat 414..436 CDD:275380 3/13 (23%)
leucine-rich repeat 437..459 CDD:275380 4/25 (16%)
leucine-rich repeat 460..483 CDD:275380 7/22 (32%)
leucine-rich repeat 484..510 CDD:275380 7/26 (27%)
leucine-rich repeat 511..534 CDD:275380 10/22 (45%)
leucine-rich repeat 535..589 CDD:275380 13/56 (23%)
LRR 543..971 CDD:443914 63/195 (32%)
leucine-rich repeat 590..613 CDD:275380 8/22 (36%)
leucine-rich repeat 614..639 CDD:275380 7/24 (29%)
leucine-rich repeat 640..663 CDD:275380 9/22 (41%)
leucine-rich repeat 664..687 CDD:275380 10/22 (45%)
leucine-rich repeat 688..711 CDD:275380 9/22 (41%)
leucine-rich repeat 712..735 CDD:275380 6/23 (26%)
leucine-rich repeat 740..783 CDD:275380
leucine-rich repeat 785..808 CDD:275380
leucine-rich repeat 809..832 CDD:275380
leucine-rich repeat 833..856 CDD:275380
leucine-rich repeat 857..879 CDD:275380
leucine-rich repeat 880..900 CDD:275380
leucine-rich repeat 905..928 CDD:275380
LRR 911..>1203 CDD:443914
leucine-rich repeat 929..952 CDD:275380
leucine-rich repeat 953..977 CDD:275380
leucine-rich repeat 978..1020 CDD:275380
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
PCC 1230..>1298 CDD:188093
Rxfp2XP_011239323.1 LDLa 31..66 CDD:238060
LRR <123..>350 CDD:443914 80/242 (33%)
leucine-rich repeat 125..148 CDD:275380 7/22 (32%)
leucine-rich repeat 149..172 CDD:275380 7/26 (27%)
leucine-rich repeat 173..196 CDD:275380 10/22 (45%)
leucine-rich repeat 197..220 CDD:275380 5/30 (17%)
leucine-rich repeat 221..244 CDD:275380 8/24 (33%)
leucine-rich repeat 245..268 CDD:275380 8/22 (36%)
leucine-rich repeat 269..292 CDD:275380 7/24 (29%)
leucine-rich repeat 293..316 CDD:275380 9/22 (41%)
leucine-rich repeat 317..340 CDD:275380 10/22 (45%)
leucine-rich repeat 341..360 CDD:275380 8/18 (44%)
7tm_GPCRs 403..688 CDD:475119
TM helix 1 404..428 CDD:410628
TM helix 2 437..458 CDD:410628
TM helix 3 482..504 CDD:410628
TM helix 4 526..542 CDD:410628
TM helix 5 574..597 CDD:410628
TM helix 6 623..645 CDD:410628
TM helix 7 656..681 CDD:410628
Blue background indicates that the domain is not in the aligned region.

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