DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and tlr8

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_002933859.2 Gene:tlr8 / 100496108 XenbaseID:XB-GENE-485083 Length:1037 Species:Xenopus tropicalis


Alignment Length:927 Identity:219/927 - (23%)
Similarity:367/927 - (39%) Gaps:281/927 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 ISERSFSTMTHSLMTLDISGNKMQHLPLDALQRLHSLSRLVAQR-------------NHITTLDG 186
            |:|.||      .::.|.|..:::.:|........|...|::|.             :::|.:|.
 Frog    35 ITENSF------FVSFDCSARRLKMVPHPITYNSDSAELLLSQNLILTINNESFYSWHNLTKIDL 93

  Fly   187 NWDAQHDTLRSLHLSDNDITEVAPGGGSIEVVSQNDNSSQPSSLAAVQTRLETSNSIYPPSPSSG 251
            ||:....:    .|::.|:.:     ..:|:                                  
 Frog    94 NWNHYPKS----RLNNTDLCK-----RGLEI---------------------------------- 115

  Fly   252 DRTTGGRPFEQLQKLLWLDLSNNRIYHVAGNYLPRSLVTMDLSSNLLTVFPQQLFEQLPELRIVS 316
                |...|..|.||..|.:.:|.:..:... :|.::.|:.||.|                .|.|
 Frog   116 ----GNETFSYLTKLEELFIDHNFLCKIPQG-IPSTVQTLSLSYN----------------NIFS 159

  Fly   317 LRDNLIRSVQWKELQVRPLRMHLERLDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLPE 381
            ::..::          .|| ::|::|.|..||....|.|                          
 Frog   160 VKKQIL----------SPL-INLKKLFLNHNCYFGNECD-------------------------- 187

  Fly   382 AVFKATGIAHLVLAFNAISRVHPSAFEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQ 446
                     |:|       .:....|.|||| |..|||..|.:|.||..|.:  .||.|||::|.
 Frog   188 ---------HVV-------DIEEGTFAGLTE-LTVLDLSFNNMTRVPAKLPA--SLKELYLSNNN 233

  Fly   447 I-----SQLNNLPSFTENLRVLSLSGN-------NFS----------MIPVLGLKNYTQLSYLNM 489
            |     ..|.||    .||.||.|:||       |:.          .|..|..:|...|:.|::
 Frog   234 IQIIHSDDLQNL----INLEVLFLNGNCPRCFNANYPCKNLCKQISITIDPLAFQNLKNLTELHL 294

  Fly   490 GYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHL--HLGS---FAGLEQIQEISLSFN-DITIH 548
            |..|:..||      ..|..|...:.:.|.::.:|  .:.|   ...|..::.:.|||| |:..:
 Frog   295 GSTSLRTIP------PIWFQNTTQLKILNLQLNYLVNEIASADFLLNLPFLEVLDLSFNYDLRSY 353

  Fly   549 HPLVFENVSR------TLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNES 607
            ...:  |:|.      :|:.|.:...||...:.::|.|   |:.|.:|..:.|..|.:|||..|.
 Frog   354 ANNI--NISNHFSKLISLQELHIQGYVFKHIAAKNLSP---LINLPKLATINLGINFIKQVDFEV 413

  Fly   608 FAQMRELSYINLSFNQLK-------------------------TLP-RGLFQ-SDAHSHLVE--- 642
            |..:..|..|.||.|::.                         |.| :..|| :...||||:   
 Frog   414 FQNISGLKLIYLSENRITPFSETNKQLFGVCKDQSYRISSPGVTFPTQSNFQMTKIFSHLVKPQC 478

  Fly   643 ------IDLSYNGLERLEAQTFHSLGDLQTLNLQSNRL-RTIARHAFHNLEFLRYLDLSYNRLVN 700
                  :|||.|.:..::.:.|.|..|:..|||..|.: :.:....|..|:.|.|||||:|:|..
 Frog   479 SSRGKTLDLSLNSIFFIDPEEFRSFSDVSCLNLSFNSIGQDLNGTEFIYLKNLTYLDLSFNKLDF 543

  Fly   701 ISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQL 765
            .|..||..||:|..|||.:|        |..::.:..|         |...|.:.|   .|:..|
 Frog   544 DSINAFQELPSLEVLDLSYN--------SHYFIVDGVT---------HRLKFIENL---QYLKVL 588

  Fly   766 DISHNHVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAHNNLTSLRRRSFQGL 830
            ::|.|.::....|...:::|:.|..:.|:|..|..:.  |..:.|:               |:.|
 Frog   589 NLSWNKISTLTDFRLTSHSLKELQFSGNRLDVLWKNE--DKRYQEL---------------FKNL 636

  Fly   831 NSLQELDLSHNQLDQLQVEQFSNL-RKLRILRINSNRL-----RALPREVFMNTRLEFLDIAENQ 889
            .:|..||:|:|:|:::...:.||| ..|..|.:|:|:|     :||  :.:.|  |:.||::.|:
 Frog   637 YNLTCLDISYNRLNKMTEVELSNLPLSLTELYLNNNKLDYFGWKAL--KAYKN--LKHLDLSHNK 697

  Fly   890 LSVWPVPAFTDI-GFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFL--- 950
            |::  :.....| .::|.|:.:|:|::..|..:....|:.|.::.|:.|.:..:  |:..||   
 Frog   698 LTM--IMGNLSIHTYSLSSLIISYNSISSLPVAFLHKSRNLSELDLSFNHLKSI--NSSVFLSGS 758

  Fly   951 -NNLTNLDLSQNPLVTT 966
             |.||.|.|..||.|.|
 Frog   759 ENYLTVLGLKGNPFVCT 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268 38/230 (17%)
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380 4/10 (40%)
leucine-rich repeat 147..170 CDD:275380 3/22 (14%)
leucine-rich repeat 171..194 CDD:275380 6/35 (17%)
leucine-rich repeat 195..214 CDD:275380 2/18 (11%)
leucine-rich repeat 215..236 CDD:275380 1/20 (5%)
leucine-rich repeat 266..287 CDD:275380 4/20 (20%)
leucine-rich repeat 288..311 CDD:275380 4/22 (18%)
leucine-rich repeat 312..338 CDD:275380 4/25 (16%)
LRR <338..651 CDD:443914 96/382 (25%)
leucine-rich repeat 339..365 CDD:275380 7/25 (28%)
leucine-rich repeat 366..388 CDD:275380 0/21 (0%)
leucine-rich repeat 389..412 CDD:275380 5/22 (23%)
leucine-rich repeat 414..436 CDD:275380 9/21 (43%)
leucine-rich repeat 437..459 CDD:275380 10/26 (38%)
leucine-rich repeat 460..483 CDD:275380 10/39 (26%)
leucine-rich repeat 484..510 CDD:275380 7/25 (28%)
leucine-rich repeat 511..534 CDD:275380 4/27 (15%)
leucine-rich repeat 535..589 CDD:275380 15/60 (25%)
LRR 543..971 CDD:443914 127/479 (27%)
leucine-rich repeat 590..613 CDD:275380 8/22 (36%)
leucine-rich repeat 614..639 CDD:275380 9/51 (18%)
leucine-rich repeat 640..663 CDD:275380 8/31 (26%)
leucine-rich repeat 664..687 CDD:275380 6/23 (26%)
leucine-rich repeat 688..711 CDD:275380 12/22 (55%)
leucine-rich repeat 712..735 CDD:275380 6/22 (27%)
leucine-rich repeat 740..783 CDD:275380 8/42 (19%)
leucine-rich repeat 785..808 CDD:275380 6/22 (27%)
leucine-rich repeat 809..832 CDD:275380 3/22 (14%)
leucine-rich repeat 833..856 CDD:275380 9/23 (39%)
leucine-rich repeat 857..879 CDD:275380 8/26 (31%)
leucine-rich repeat 880..900 CDD:275380 5/19 (26%)
leucine-rich repeat 905..928 CDD:275380 6/22 (27%)
LRR 911..>1203 CDD:443914 19/60 (32%)
leucine-rich repeat 929..952 CDD:275380 6/26 (23%)
leucine-rich repeat 953..977 CDD:275380 8/14 (57%)
leucine-rich repeat 978..1020 CDD:275380
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
PCC 1230..>1298 CDD:188093
tlr8XP_002933859.2 leucine-rich repeat 45..64 CDD:275380 3/18 (17%)
LRR 66..453 CDD:443914 109/521 (21%)
leucine-rich repeat 66..87 CDD:275380 2/20 (10%)
leucine-rich repeat 88..125 CDD:275380 10/83 (12%)
leucine-rich repeat 126..145 CDD:275380 3/19 (16%)
leucine-rich repeat 147..170 CDD:275380 8/49 (16%)
leucine-rich repeat 171..202 CDD:275380 12/72 (17%)
leucine-rich repeat 203..223 CDD:275380 9/21 (43%)
leucine-rich repeat 224..247 CDD:275380 10/26 (38%)
leucine-rich repeat 248..288 CDD:275380 10/39 (26%)
leucine-rich repeat 289..312 CDD:275380 8/28 (29%)
leucine-rich repeat 313..338 CDD:275380 4/24 (17%)
leucine-rich repeat 339..368 CDD:275380 7/30 (23%)
leucine-rich repeat 400..419 CDD:275380 7/18 (39%)
LRR 483..849 CDD:443914 94/338 (28%)
leucine-rich repeat 483..505 CDD:275380 6/21 (29%)
leucine-rich repeat 509..530 CDD:275380 6/20 (30%)
leucine-rich repeat 531..554 CDD:275380 12/22 (55%)
leucine-rich repeat 555..584 CDD:275380 10/48 (21%)
leucine-rich repeat 585..607 CDD:275380 4/21 (19%)
leucine-rich repeat 608..638 CDD:275380 9/46 (20%)
leucine-rich repeat 639..663 CDD:275380 9/23 (39%)
leucine-rich repeat 664..687 CDD:275380 7/24 (29%)
leucine-rich repeat 688..711 CDD:275380 6/24 (25%)
leucine-rich repeat 712..735 CDD:275380 6/22 (27%)
leucine-rich repeat 736..754 CDD:275380 4/19 (21%)
SEFIR 877..1014 CDD:474043
Blue background indicates that the domain is not in the aligned region.

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