DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4168 and XB5889249

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_017950848.2 Gene:XB5889249 / 100495326 XenbaseID:XB-GENE-5889250 Length:796 Species:Xenopus tropicalis


Alignment Length:948 Identity:202/948 - (21%)
Similarity:344/948 - (36%) Gaps:308/948 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 LDLGQNCIENLESDYFQQNYSDVHLRALNLEQNFVTQLPEAVFKATGIAHLVLAFNAISRVHPSA 406
            ||..:..|.:|::..|.   ..:.||.|||..|.:.:|..:|||          ||      || 
 Frog    50 LDFTKENITHLKTSDFN---CFLQLRLLNLSHNLIGELDCSVFK----------FN------PS- 94

  Fly   407 FEGLTETLEYLDLERNRLTTVPVALSSLHHLKYLYLTSNQISQLNNLPSFTENLRVLSLSGNNF- 470
                   |||||:..|||.|:     ..|.|:|:                 :|::.:.||.||| 
 Frog    95 -------LEYLDISNNRLHTI-----KCHSLQYI-----------------KNIKRMDLSYNNFK 130

  Fly   471 -----------SMIPVLGL--KNYTQLSYLNMGYNSITDIPEGI-FAVDSWGSNLQTILLRNNKI 521
                       |.:..|||  |...:.|::|:....:..:..|| ..::....:||  .|..||:
 Frog   131 TMDFCSEFTALSQLKHLGLSSKKIQKDSFINIASMDLDFVFLGIENEIEYENGSLQ--FLNTNKL 193

  Fly   522 THLHL-------GSFA---GLEQIQEISLSFNDITIH---HPLVFENVSRTLKILELSFAVFPAR 573
             |::|       .|:.   .|:....:.:|.....:|   ....|..:::..|::.|..:     
 Frog   194 -HINLQPNLSLASSYLLSDALDTSMTLEVSGAQCDVHCDYFTKSFFTINKNSKVVNLIIS----- 252

  Fly   574 SLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSYINLSF--NQLKTLPRGLFQSDA 636
              .|..|.:.:|.:...||    :::::.:..:.|..::|..|:.:.|  :.:|:.....|.:|.
 Frog   253 --NSTMPGNEMLKIIPPIW----DSSVEHLHIKMFRLIKEFKYVKMDFTHHSIKSFTLEYFTNDV 311

  Fly   637 H----SH--------LVE-IDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFL 688
            .    :|        ||| :..|..|:.........|:  ::.|||.|||   |....|.|...|
 Frog   312 FFFQGTHPFNIFAEMLVENVTFSNAGMIHFFCPPVPSI--VRFLNLPSNR---ITDEIFLNCSSL 371

  Fly   689 RYLDLSYNRLVNISHGAFTVLPNLAALDLMHNQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFY 753
            ..|:|                     |:|.:|:|..:|     .:|:.|..:: |:.|       
 Frog   372 NELEL---------------------LNLQNNKLEQMS-----KISSMTLKMK-NLKH------- 402

  Fly   754 DELSSYMYIYQLDISHN--HVTKSDSFTNLANTLRFLNLAHNQLGSLQSHAFGDLEFLEILNVAH 816
                       ||:|.|  |: .::...|..::|.||||:.:   .|.:..||.|..        
 Frog   403 -----------LDLSKNGLHI-DNEKQCNWMDSLVFLNLSES---GLTNSVFGCLPI-------- 444

  Fly   817 NNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLE 881
                           :||.||||.||:..:.:| ..|...|:.|.:.||||..:|....:...|.
 Frog   445 ---------------NLQILDLSKNQISSIPIE-VKNFVSLKELHLASNRLTDIPDCHNIGNNLG 493

  Fly   882 FLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNNLEYLDASMFINSQFLYDISLARNRITILPD-N 945
            .|.:.||.:::.|                    .|:|.     |.:::..:|..:|......| .
 Frog   494 VLKVDENFINLPP--------------------KEFLQ-----NCEYVQYLSAGQNPFQCNCDLR 533

  Fly   946 TF-----SFLNNLTNLDLSQNPLVTTNLREVFVHTPRLRKLSLH---HMG-----LYVLPPLKLP 997
            .|     .|...|.....|.......|::.:|:....|.::|.:   .:|     ::|:..:.:.
 Frog   534 EFVKMGVMFPKRLVGWPESYKCADPENVKGIFLQDFHLSEISCNTSLFLGVVLGTIFVVSIIVVS 598

  Fly   998 LLSYLDVSGNYLQELSPLGSLRH-LRHVN---VSHNKLTNASCAAEHLPPSVRVLDLAHNPLRRI 1058
            ...|.||.. |::.|......:| ||:||   :.::||.:|     .:..|....|...|.|.  
 Frog   599 ACFYFDVPW-YIRMLFRWFRTKHRLRNVNQQDIQNDKLFHA-----FISYSQEDSDWVKNMLL-- 655

  Fly  1059 TLHDLASLRHLAELNILDVKVTNPQAFSKLRSLRKLHASSHANLGEIVARIPGLQQLR--VHCLE 1121
                                   |....|..|::..|...|.        |||...:.  :.|:|
 Frog   656 -----------------------PNLERKDGSIKICHHERHF--------IPGKAIIENIIDCIE 689

  Fly  1122 ----------PNIGQQ-------------LFAKLANNTKIRLLELYGSNVQTIAPDVFTGLSRSQ 1163
                      ||..|.             ||.|.:||..:.||:   ...|...|:.:      .
 Frog   690 KSFKSIFVLSPNFIQSDWCHYELYFAQHTLFGKNSNNLILILLD---PIPQYSIPNKY------N 745

  Fly  1164 RLQVKISHTRISDLPP-----GIFYA-LREVPHLSIDI 1195
            :|:..:.|....:.|.     .:|:| |||..|:::.|
 Frog   746 KLRSIMKHRTYLEWPKEKGKHALFWANLREAIHVNLSI 783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268 3/10 (30%)
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 78/351 (22%)
leucine-rich repeat 339..365 CDD:275380 5/22 (23%)
leucine-rich repeat 366..388 CDD:275380 10/21 (48%)
leucine-rich repeat 389..412 CDD:275380 4/22 (18%)
leucine-rich repeat 414..436 CDD:275380 9/21 (43%)
leucine-rich repeat 437..459 CDD:275380 2/21 (10%)
leucine-rich repeat 460..483 CDD:275380 10/36 (28%)
leucine-rich repeat 484..510 CDD:275380 4/26 (15%)
leucine-rich repeat 511..534 CDD:275380 9/32 (28%)
leucine-rich repeat 535..589 CDD:275380 8/56 (14%)
LRR 543..971 CDD:443914 92/453 (20%)
leucine-rich repeat 590..613 CDD:275380 3/22 (14%)
leucine-rich repeat 614..639 CDD:275380 5/30 (17%)
leucine-rich repeat 640..663 CDD:275380 6/23 (26%)
leucine-rich repeat 664..687 CDD:275380 9/22 (41%)
leucine-rich repeat 688..711 CDD:275380 3/22 (14%)
leucine-rich repeat 712..735 CDD:275380 5/22 (23%)
leucine-rich repeat 740..783 CDD:275380 8/44 (18%)
leucine-rich repeat 785..808 CDD:275380 9/22 (41%)
leucine-rich repeat 809..832 CDD:275380 0/22 (0%)
leucine-rich repeat 833..856 CDD:275380 10/22 (45%)
leucine-rich repeat 857..879 CDD:275380 7/21 (33%)
leucine-rich repeat 880..900 CDD:275380 5/19 (26%)
leucine-rich repeat 905..928 CDD:275380 3/22 (14%)
LRR 911..>1203 CDD:443914 65/334 (19%)
leucine-rich repeat 929..952 CDD:275380 5/28 (18%)
leucine-rich repeat 953..977 CDD:275380 4/23 (17%)
leucine-rich repeat 978..1020 CDD:275380 9/49 (18%)
leucine-rich repeat 1045..1068 CDD:275380 3/22 (14%)
leucine-rich repeat 1069..1090 CDD:275380 2/20 (10%)
leucine-rich repeat 1091..1114 CDD:275380 5/22 (23%)
leucine-rich repeat 1115..1161 CDD:275380 14/70 (20%)
leucine-rich repeat 1162..1190 CDD:275380 8/33 (24%)
PCC 1230..>1298 CDD:188093
XB5889249XP_017950848.2 leucine-rich repeat 48..70 CDD:275378 5/22 (23%)
LRR <70..229 CDD:443914 51/207 (25%)
LRR_8 70..129 CDD:404697 30/104 (29%)
leucine-rich repeat 71..94 CDD:275378 12/38 (32%)
leucine-rich repeat 95..118 CDD:275378 12/44 (27%)
leucine-rich repeat 119..143 CDD:275378 5/23 (22%)
LRR <396..>526 CDD:443914 44/201 (22%)
leucine-rich repeat 400..423 CDD:275380 7/41 (17%)
leucine-rich repeat 424..445 CDD:275378 9/46 (20%)
leucine-rich repeat 446..468 CDD:275378 10/22 (45%)
leucine-rich repeat 469..491 CDD:275378 7/21 (33%)
leucine-rich repeat 492..515 CDD:275378 8/47 (17%)
leucine-rich repeat 516..528 CDD:275378 2/11 (18%)
LRRCT 524..576 CDD:214507 9/51 (18%)
TIR 636..777 CDD:214587 35/187 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.