DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4168 and tlr6

DIOPT Version :10

Sequence 1:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster
Sequence 2:XP_017950845.1 Gene:tlr6 / 100493946 XenbaseID:XB-GENE-492949 Length:842 Species:Xenopus tropicalis


Alignment Length:766 Identity:152/766 - (19%)
Similarity:281/766 - (36%) Gaps:216/766 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 LIWLGLDNNNLKQVSNESFAQMRELSYINLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLE 654
            ||:|......::|       ::.|....|.|...|..:|:.|     .|....:|:|:|.:..:|
 Frog     8 LIYLSSSGQCVRQ-------EIFESHIANYSNKFLFAVPKNL-----SSLTTVLDISFNSIATME 60

  Fly   655 AQTFHSLGDLQTLNLQSNRLRTIARHAFHNLEFLRYLDLSYNRLVNISHGAFTVLPNLAALDLMH 719
            ...|:.:.|||.||...|:::.:....|.....|:|||.|:|.|.||| |.|.  .::..||:..
 Frog    61 TSEFNYIFDLQVLNASYNKMKYLNSSIFKFNTQLQYLDFSHNVLRNIS-GTFP--SHIQHLDISF 122

  Fly   720 NQLCSLSLKSFLYVSNTTTPLRLNVSHNHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLANT 784
            |...:||:.|                         ...:.:.:..|.:..:.:.||| |..:.:.
 Frog   123 NNFQTLSVCS-------------------------GFGNMVLLEYLGLGADQILKSD-FEGIVHL 161

  Fly   785 LRFLNLAHNQLGSLQSHAFGDLEFLEI--LNVAHNNLTSLRRRS--FQGLNSLQELDLSHNQLDQ 845
              .|.....:|.||..:..|.|..|..  |.:....|::..|.:  |..:|:...|:|||.|...
 Frog   162 --HLKEVFIELNSLNDYENGSLLLLNTKKLTLDFGVLSNEDRYNVLFDAVNTTSVLELSHLQRWN 224

  Fly   846 LQVEQFSNLRKLRILRINSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQM 910
            :.::                     |::...|       |.:|.       ..||:  |:|.:.:
 Frog   225 IHID---------------------PKKYIFN-------IVQNS-------KVTDL--TMRHVNV 252

  Fly   911 S------------HNNLEYLDASMFINSQFLYDISLARNRITILPDNTFSFLN------NLTNLD 957
            .            |:::|.|.         .||.||.    .::...:|.:.|      |:..::
 Frog   253 EWKMIVLALQYIWHSSVETLT---------FYDFSLK----GLIAKTSFDYSNTSVKAVNVQGVN 304

  Fly   958 LSQNPLVTTNLREVFVHTPRLRKLSLHHMG-LYVLPPLKLPLLSYLDVSGNYLQE--LSPLGSLR 1019
            :.......:::..||.:. .:..|:|:... |:::.||.......:|.|.|.|.:  .....:|.
 Frog   305 VGVFQFDQSSVYRVFSNM-NIENLTLNFASLLFMVCPLNSSTFQSIDFSHNALTDDLFKDCFTLI 368

  Fly  1020 HLRHVNVSHNKLT---NASCAAEHLPPSVRVLDLAHNPLRRITLHDLASLRHLAELNILDVKVTN 1081
            :|:.:.:..|||.   ..|...|:: ||:..||.:|| |......|....:::.|||:....:| 
 Frog   369 NLKRLKLRKNKLEKIYKLSAMTENM-PSLEYLDASHN-LLAYDEEDCHWSQNIVELNLASNFLT- 430

  Fly  1082 PQAFSKLRSLRKLHASSHANLGEIVARIPGLQQLRVHCLEPNIGQQLFAKLANNTKIRLLELYGS 1146
                                                        ..:|..|..:.||.:||   |
 Frog   431 --------------------------------------------ASIFKCLPISIKILILE---S 448

  Fly  1147 NVQTIAPDVFTGLSRSQRLQVKISHTRISDLPPGIFYALREVPHLS-IDISHNRINALAADSFYP 1210
            |..|..|...|.|  ...:::.:|..|:.|||.     ...:..|| :.:..|:|       .||
 Frog   449 NDITHVPSGVTHL--DDLVELNLSFNRLGDLPD-----CSNISSLSLLGVEGNQI-------LYP 499

  Fly  1211 NKSYWDAVGTRSIMGGLITSHNPLECECGLVWFGHWLRRWLRESAQIKVIQKDDLKRMVQRARAN 1275
            :   .:::.:.|.:..:....||.:|.|.       |||::.:       :|:....::....|.
 Frog   500 S---IESIESCSRVKHISAGQNPFQCNCE-------LRRFINQ-------EKEAPGTLIGWPEAY 547

  Fly  1276 TCHDPTSGRHLPILEIFPEDLLCQASALSSSGQRIFLLSFAMALLIPIVMT 1326
            .|..|...|...:.:.:..::.|          .:|:|  ...:::||:::
 Frog   548 VCKYPDHLRGTMLKDFYISEITC----------NVFIL--IPVIILPIIIS 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 14/60 (23%)
leucine-rich repeat 339..365 CDD:275380
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
leucine-rich repeat 414..436 CDD:275380
leucine-rich repeat 437..459 CDD:275380
leucine-rich repeat 460..483 CDD:275380
leucine-rich repeat 484..510 CDD:275380
leucine-rich repeat 511..534 CDD:275380
leucine-rich repeat 535..589 CDD:275380
LRR 543..971 CDD:443914 81/402 (20%)
leucine-rich repeat 590..613 CDD:275380 4/22 (18%)
leucine-rich repeat 614..639 CDD:275380 5/24 (21%)
leucine-rich repeat 640..663 CDD:275380 5/22 (23%)
leucine-rich repeat 664..687 CDD:275380 6/22 (27%)
leucine-rich repeat 688..711 CDD:275380 12/22 (55%)
leucine-rich repeat 712..735 CDD:275380 6/22 (27%)
leucine-rich repeat 740..783 CDD:275380 5/42 (12%)
leucine-rich repeat 785..808 CDD:275380 6/22 (27%)
leucine-rich repeat 809..832 CDD:275380 5/26 (19%)
leucine-rich repeat 833..856 CDD:275380 5/22 (23%)
leucine-rich repeat 857..879 CDD:275380 2/21 (10%)
leucine-rich repeat 880..900 CDD:275380 2/19 (11%)
leucine-rich repeat 905..928 CDD:275380 4/34 (12%)
LRR 911..>1203 CDD:443914 61/316 (19%)
leucine-rich repeat 929..952 CDD:275380 6/28 (21%)
leucine-rich repeat 953..977 CDD:275380 2/23 (9%)
leucine-rich repeat 978..1020 CDD:275380 10/44 (23%)
leucine-rich repeat 1045..1068 CDD:275380 6/22 (27%)
leucine-rich repeat 1069..1090 CDD:275380 4/20 (20%)
leucine-rich repeat 1091..1114 CDD:275380 0/22 (0%)
leucine-rich repeat 1115..1161 CDD:275380 12/45 (27%)
leucine-rich repeat 1162..1190 CDD:275380 5/27 (19%)
PCC 1230..>1298 CDD:188093 12/67 (18%)
tlr6XP_017950845.1 LRR <38..264 CDD:443914 63/298 (21%)
leucine-rich repeat 46..69 CDD:275378 5/22 (23%)
leucine-rich repeat 70..93 CDD:275378 6/22 (27%)
leucine-rich repeat 94..114 CDD:275378 12/22 (55%)
leucine-rich repeat 115..139 CDD:275378 6/48 (13%)
LRR <320..>508 CDD:443914 51/255 (20%)
leucine-rich repeat 347..369 CDD:275380 5/21 (24%)
leucine-rich repeat 370..395 CDD:275380 6/25 (24%)
leucine-rich repeat 396..418 CDD:275380 6/22 (27%)
leucine-rich repeat 419..440 CDD:275380 6/65 (9%)
leucine-rich repeat 441..463 CDD:275380 10/26 (38%)
leucine-rich repeat 464..485 CDD:275380 5/25 (20%)
leucine-rich repeat 486..509 CDD:275380 6/32 (19%)
LRRCT 518..570 CDD:214507 12/65 (18%)
TIR 632..775 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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