DRSC/TRiP Functional Genomics Resources

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Protein Alignment: TfIIS and BYE1

Sequence 1:NP_001260457.1 Gene:TfIIS FlyBaseID:FBgn0010422 Length:313 Species:Drosophila melanogaster
Sequence 2:NP_012921.3 Gene:BYE1 SGDID:S000001488 Length:594 Species:Saccharomyces cerevisiae

Alignment Length:238 Identity:56/239 (23%)
Similarity:92/239 (38%) Gaps:58/239 (24%)


  Fly    79 FLASPAPTTPNNS--SAK---------EGSSNNSSASKSTSAAKSSSSISGKDKSSSSSSSKD-- 130
            ||...:|.....|  |||         :.|:.:...:||..||||.::.:.........|.|:  
Yeast   172 FLDEESPRKRKRSPDSAKGIHIKSKQVKKSNGSKKRNKSIDAAKSDTAENEMPTRKDFESEKEHK 236

  Fly   131 ----KEKKGSTSSSQTSFPSGGMTDAVRIKCREMLATALKIGEVPEG---CGEPEEMAAELEDAI 188
                .||..||..|:...|.               ....|:.|:|:|   ....:|.|..||:.:
Yeast   237 LRYNAEKMFSTLFSKFIVPE---------------TIEAKLYELPDGKDVISISQEFAHNLEEEL 286

  Fly   189 YS-----EFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKL 248
            |.     ||...|..|..::||..:||||.||..|:.:.:.|.:...:|..|...|:|:.::::.
Yeast   287 YKACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLVNMNASELANPDLQEF 351

  Fly   249 REK------------------FVKEAINDAQLATVQGTKTDLL 273
            :||                  :||....|..:..:...:.|:|
Yeast   352 KEKRDKIILENFIVEVPDKPMYVKTHKGDELIEDIAEPQEDIL 394

Known Domains:


GeneSequenceDomainRegion External IDIdentity
TfIISNP_001260457.1 TFSII 5..313 CDD:273592 56/239 (23%)
TFS2N 7..82 CDD:197766 2/3 (67%)
TFIIS_M 151..257 CDD:284835 31/132 (23%)
Zn-ribbon_TFIIS 266..312 CDD:259796 2/9 (22%)
BYE1NP_012921.3 PHD_Bye1p_SIZ1_like 74..131 CDD:277045
CDC45 104..>197 CDD:280821 7/25 (28%)
TFS2M 235..354 CDD:128786 34/134 (25%)
SPOC <475..547 CDD:285043
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR11477
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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