Protein Alignment TfIIS and TFIIS

DIOPT Version :9

• Sequence 1: NP_001260457.1
• Gene: TfIIS / 34883
• FlyBaseID: FBgn0010422
• Length: 313
• Species: Drosophila melanogaster
• Sequence 2: NP_181390.1
• Gene: TFIIS / 818438
• AraportID: AT2G38560
• Length: 378
• Species: Arabidopsis thaliana
• Alignment Length: 374
• Identity: 102/374 - (27%)
• Similarity: 160/374 - (42%)
• Gaps: 68/374 - (18%)

  Fly     6 EVFRIQKKMSKMA------SDGTGQDQALDLLKALQTLNINLDILTKTRIGMTVNELRKSSKDDE 64
            ::|...||.:..|      |.|....|.:|.||.|:...:..|.|..|::|..:..|.|...:|
plant     7 DLFEGAKKAADAAALDGVTSSGPEVSQCIDALKQLKKFPVTYDTLVATQVGKKLRSLAKHPVED- 70

  Fly    65 VIALAKTLIKNWKRFL---ASPAPTTPNNSSAKEGSSNNSSASKSTSAA----------KSSSSI 116
            :.::|..|::.||:.:   .:.|..|...:..||...|.....|.::.|          .|:.||
plant    71 IKSVATDLLEIWKKVVIEETAKAKKTEGTNGCKEAKVNKMDVEKPSNPAPVKVQKLQRGDSAKSI 135

  Fly   117 SGKDKSSSS---------------------------SSSKDKEKKGSTSSSQTSFPSGG------ 148
            ..:.|...:                           .:.|| ||....:.|....|:..
plant   136 KVERKEPDNKVVTGVKIERKVPDIKVTNGTKIDYRGQAVKD-EKVSKDNQSSMKAPAKAANAPPK 199

  Fly   149 ------MTDAVRIKCREMLATAL--KIGEVPE------GCGEPEEMAAELEDAIYSEFNNTDMKY 199
                  ..|.||.|.||:|..||  ..||..:      ...:|..:|..:|..::.:...:....
plant   200 LTAMLKCNDPVRDKIRELLVEALCRVAGEADDYERESVNASDPLRVAVSVESLMFEKLGRSTGAQ 264

  Fly   200 KNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLAT 264
            |.:.||.:.||:|..||.||...:.|.::.::|..::.|:||||:.|:...:..::|:.|.:...
plant   265 KLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDKRKQENNQIKEKALFDCERGL 329

  Fly   265 VQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMCNECGNRWKFC 313
            .....||..||.:|.:|.|||.|:|||||||||||:|.|..|.|.||||
plant   330 AAKASTDQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWKFC 378

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
TfIIS	NP_001260457.1	TFSII	5..313	CDD:273592	100/372 (27%)
		TFS2N	7..82	CDD:197766	22/83 (27%)
		TFIIS_M	151..257	CDD:284835	32/113 (28%)
		Zn-ribbon_TFIIS	266..312	CDD:259796	26/45 (58%)
TFIIS	NP_181390.1	TFSII	21..378	CDD:273592	96/358 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	64	1.000	Domainoid score	I3706
eggNOG	1	0.900	-	-		E1_COG1594
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	135	1.000	Inparanoid score	I1834
OMA	1	1.010	-	-		QHG53988
OrthoDB	1	1.010	-	-		D1579101at2759
OrthoFinder	1	1.000	-	-		FOG0001112
OrthoInspector	1	1.000	-	-		mtm1141
orthoMCL	1	0.900	-	-		OOG6_101177
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X770
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	13	12.740