Protein Alignment CG3491 and sno

DIOPT Version :10

• Sequence 1: NP_609731.1
• Gene: CG3491 / 34870
• FlyBaseID: FBgn0028887
• Length: 1801
• Species: Drosophila melanogaster
• Sequence 2: NP_001096967.1
• Gene: sno / 32273
• FlyBaseID: FBgn0265630
• Length: 1653
• Species: Drosophila melanogaster
• Alignment Length: 1778
• Identity: 743/1778 - (41%)
• Similarity: 970/1778 - (54%)
• Gaps: 378/1778 - (21%)

  Fly   247 NF--DSKSSDLEEAEEK----------------TYLKRQSERNFYSGYRSESEGTNITPAKRSKA 293
            ||  |...||.::.|:.                ||     .:|..||.....:|....|...:|.
  Fly    18 NFDEDDSGSDFDDDEDPDQIEVPGGGRDLNTAVTY-----AQNIRSGVGVAPKGGIPIPISGAKI 77

  Fly   294 QI--NSIPKLEYSTTYGQAQNLVVSENANITQKPSSDIKSRYRSTEYNQINKPDSQQPINYAHQK 356
            .:  |.|..:..........|:|.|.|    .:.:::|.|...|:..|
  Fly    78 VVGNNKIKPISLLRINNNNNNIVTSVN----NRNNNNIISTNGSSNNN----------------- 121

  Fly   357 EETIDRRREMHMRKEHQYVDNHLNNPAQNKPDRTVSFLEMLSQAEAKKESNQGAKKPTV------ 415
                               :|.:||.:|.....||:          ...:..|| .|||
  Fly   122 -------------------NNSINNNSQIIKTTTVT----------TTPTTVGA-TPTVGGVALG 156

  Fly   416 ----------------NKVSNVSQYLIDLGFTAGSPNHDSNSNDG--NDEQDNIDRRLNADLDSL 462
                            |.:||:.:.|.::....|||...|:.|.|  ...|.......::.|:||
  Fly   157 GKLTVIPIAGRNVALDNNLSNMPKKLNNMVTAMGSPAARSSGNAGTTGSSQGGAIGSTSSYLNSL 221

  Fly   463 FTTDEL-------------ACPPPPPLAKIPTNLTVERPHSRLSDP---------------KKIE 499
             ||:||             |.|||||  ....|.....|...:.:|               ....
  Fly   222 -TTNELMNLAAYVAAKGSNAPPPPPP--STAANSVRHSPTGGIPNPGGNFFGGSAAASTSASAAN 283

  Fly   500 SDIDARLQAELD----SLPMVAVPADENIEPLGKTDQHFSVPTNKNLSENKAFPKPNQVCIPPQP 560
            .::.|.|.|::.    :..:.|:....||..:|...:                        ||..
  Fly   284 FNMAASLLAQMSYAGGASQIRALKVAGNIGGVGNNQK------------------------PPPI 324

  Fly   561 AIPPQPAIPPAPAYCMANKTMDTGMSSVVQM-ANNPLASTQHHALPQVPIVTRLKVDQGEDVSVK 624
            |..|....|...|.....|..::.|.:|.:: |.||                           ..
  Fly   325 ATTPGSGGPAGGAPGSGVKGNNSMMEAVQKLIAMNP---------------------------EY 362

  Fly   625 FTTGLDGLITNVQLLPSTMAMGQPTVKATELESFTAQQLNMLLQSGHPYLSLPMTNSGV-PGAVL 688
            .|:|          :|:|:                   ..|.:||.....:.|..|..: |||::
  Fly   363 LTSG----------IPNTV-------------------FQMFMQSMQRPQATPSPNQPMNPGAMV 398

  Fly   689 QETLQTKDAGFPSEQAV---EDEEVDYEEIGVADTFAAYWPSKLKFGRAHPDPVVETATLSSVEL 750
              |.....|...|..|.   |::||||||:|||:|:|.|||:|||.|:.|||.|||||:|||||.
  Fly   399 --TSAAAAAAHASAVAYVQQEEDEVDYEEMGVAETYADYWPAKLKLGKKHPDAVVETASLSSVEP 461

  Fly   751 PNINYQLALPSKTTEC--LSALQLEAVVYACQAHEQILPSGDRAGFLLGDGAGVGKGRTIAGIIF 813
            .::.|:|:||.:|...  |||||||::.||.|||:.:||.|.|||||:||||||||||||||||:
  Fly   462 CDVYYKLSLPLETINSGHLSALQLESITYASQAHDHLLPDGSRAGFLIGDGAGVGKGRTIAGIIY 526

  Fly   814 DNYLKGRKRALWVSVSSDLKFDAERDLADIGAHEKIRVATINKFKYSPIDSEENENFKRGVIFCT 878
            :|||||||:|||:|||:|||:||||||:|||| .:|.|..:|||||:.|.|:.|.|.||||||.|
  Fly   527 ENYLKGRKKALWISVSNDLKYDAERDLSDIGA-TRIEVHALNKFKYAKISSDVNNNCKRGVIFST 590

  Fly   879 YTALIGESMTTNSKYKTRFRQLTNWLGKKFEGVIVFDECHKAKNLSLMNVGKSTKTGTTVLDLQK 943
            |:||||||.....||::|||||..|.|:.|||:|:||||||||||..:..||.||||.|||:||:
  Fly   591 YSALIGESNNKTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQ 655

  Fly   944 LLPNARVVYASATGASEPRNMAYMVRLGLWGPGTAYPEFYEFVNAVEKRGIGAMEIVAMDMKLRG 1008
            .||.||||||||||||||:||||||||||||.|||:..|.:|:.|||:||:||||||||||||||
  Fly   656 KLPKARVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAVERRGVGAMEIVAMDMKLRG 720

  Fly  1009 TYIARQLSFKDVSFRIEEVNMSKEFRKSYNLSAELWADIHKKFQKACRLMCVENRVQKIITCQFW 1073
            .|||||||||.|||:||||.:||||||.|:.|.|||.:..:||.:|..|:..|:|::|.:..|||
  Fly   721 MYIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEAMQKFTEAAELIDAESRMKKTMWGQFW 785

  Fly  1074 CAHQRFFKNLCIASKVNHVVKMTRQATRMGKAVVIGLQSTGESRTLEHLERHHGKLNSFVSTAKM 1138
            .:||||||.||||:||||.|.:.|::.:.||.||||||||||:|||:.|||..|:|..||||||.
  Fly   786 SSHQRFFKYLCIAAKVNHAVLVARESIKYGKCVVIGLQSTGEARTLDQLERDDGELTDFVSTAKG 850

  Fly  1139 IIQSFVEKHFPAPKRDSFHHLLNTGEFEPEARS-----------------------------RPP 1174
            :.|||||:|||||.|:..:.:|...:..|...|                             |..
  Fly   851 VFQSFVERHFPAPDRNRINRILGLYDETPSLSSVADSTSSLSNNSNITTAAGKRKGSNNNDNRST 915

  Fly  1175 KQKKSKMNTDW-----------------------------------VEDDMDAEAGESDIEMYER 1204
            |.||.|.:..|                                   ::.|:|.|..:.|::..:|
  Fly   916 KIKKKKRSGSWECSDSEDENTDMKRNRKRDGGNSNSDSDEANSDDDLKSDIDDEDEDHDVDSDQR 980

  Fly  1205 S-----------------------CTAAVEKIKSGQKRRGRPPKADKVEK--------------- 1231
            |                       ..|..:|.|..||:..:..|.:|.:|
  Fly   981 SVASDASSDFNPFFSGSDSDIDPWVNARSKKSKKAQKKSKKKVKKEKTKKEITTSSATDPSGSTA 1045

  Fly  1232 ------------------ITMQERILEHLCNNMREQDNEDESTNTSDNTKVKVNI--TERD-VER 1275
                              ::.|::|.:.|   .::|:.:...|....| .||:|.  ..:| :||
  Fly  1046 MSATVVAALNAVKNRKSQLSTQDKIQDLL---QKKQELKGTVTPVGVN-GVKLNYGPPPKDAIER 1106

  Fly  1276 CINMREMLLEKIDVLGRKLPPNTLDKLISELGGTNLVAEMTGRRGRVVRTEYDGYKYEPRCENDS 1340
            ...|:|.||.||:.||.:|||||||:||.||||.:.||||||||||||:|:....:||.|.|:|.
  Fly  1107 ACTMKEELLRKIERLGARLPPNTLDQLIDELGGPDNVAEMTGRRGRVVQTDDGSIQYESRTESDV 1171

  Fly  1341 TMDLVNYREKQRFMDGSKHVAIISEAASSGISLQSDKRVSNQRRRLHITLELPWSADRAIQQFGR 1405
            .::.:|..||||||||.|.|||||||||||||||||:||.|||||:|||||||||||||||||||
  Fly  1172 PLETLNITEKQRFMDGEKDVAIISEAASSGISLQSDRRVFNQRRRVHITLELPWSADRAIQQFGR 1236

  Fly  1406 THRSNQVNAPEYVFVITDLAGERRFASTVAKRLESLGALTQGDRRATDARDLSQFNIDNSIGRSA 1470
            ||||||||||||:|:|:|||||||||||||||||||||||.||||||:.||||||||||..||.|
  Fly  1237 THRSNQVNAPEYIFLISDLAGERRFASTVAKRLESLGALTHGDRRATETRDLSQFNIDNKYGRQA 1301

  Fly  1471 LENVMQQLTS-NKPLDRSQVPQSYKGNFIYDCCVAMAGVGMINVREENKVKVFTVEKDSNNISKF 1534
            ||.||:.:.. ..||  ...|..|.|.|..|...|:.|||:| |..|:...|.:::||.||||||
  Fly  1302 LETVMRTIMGYESPL--VPPPTDYSGEFFKDIAGALVGVGII-VNSESHPGVLSLDKDYNNISKF 1363

  Fly  1535 LNRILGCRVEVQNALFKFFLDKMYSLIMQMKRTGRFDLGILDLDAHGASVKSIKLMRFIRKHATG 1599
            |||||||.|::||.|||:|.|.|.::|.|.||.||||||||||.|.|.:|..::|:||:||||||
  Fly  1364 LNRILGCPVDLQNRLFKYFTDTMTAIIQQAKRGGRFDLGILDLGAAGENVTRVRLIRFVRKHATG 1428

  Fly  1600 TAATELHTVTVERGMSFETALAKYRKEGQYEHEGFYILQKRRQNKNSAILCL-------QAPSNS 1657
            .|.||:|||.|||||.::.|:.|| .:...|:||||:..:.|..|.:||:.:       .:.|::
  Fly  1429 VAPTEMHTVRVERGMIWQEAIDKY-ADLFNENEGFYLSHQLRNQKRTAIMVVILESRNSSSTSST 1492

  Fly  1658 SDVSNG----------KINLQIYRPNTGPQVRLETHASISSRYVKVSPEEAQTYWVQQYELCLNM 1712
            :|:.:|          :|..||||||||.|||.|:...:..:|.||:.|||:.:|.:||:..:|.
  Fly  1493 TDLDSGSKKKKTHSKKEIMCQIYRPNTGLQVRHESLFELEKKYRKVASEEAEPHWTEQYDASVNT 1557

  Fly  1713 CSHLYWNRTC---PMPTGCEVGLRMRTYHVLSGLMLPIWDRIELII-VNSGHKIQIIRMKTDANK 1773
            |||.|||..|   .:...||||||.|.||||:|.:|.:|.|:|.|: ..|..|:|:|||||...:
  Fly  1558 CSHAYWNGNCRNVSLGNDCEVGLRQRLYHVLAGSVLSVWGRVEHILNTRSNSKMQVIRMKTTEGE 1622

  Fly  1774 KIVGTVVPPAVYDDLVADLSTDS 1796
            |||||::|.:.::.|||||.:||
  Fly  1623 KIVGTLIPKSCFEPLVADLRSDS 1645

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3491	NP_609731.1	AAA_34	737..1038	CDD:464010	211/302 (70%)
		Helicase_C_4	1297..1576	CDD:464009	191/279 (68%)
sno	NP_001096967.1	AAA_34	448..750	CDD:464010	211/302 (70%)
		Helicase_C_4	1128..1405	CDD:464009	191/279 (68%)