DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3491 and sbno1

DIOPT Version :10

Sequence 1:NP_609731.1 Gene:CG3491 / 34870 FlyBaseID:FBgn0028887 Length:1801 Species:Drosophila melanogaster
Sequence 2:XP_017945924.1 Gene:sbno1 / 100170149 XenbaseID:XB-GENE-479411 Length:1410 Species:Xenopus tropicalis


Alignment Length:1421 Identity:632/1421 - (44%)
Similarity:848/1421 - (59%) Gaps:179/1421 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 ESDIDARLQAELDSLPM-VAVPADENIEPLGKTDQHFSVPTNKNLSENKAFPKPNQVCIPPQPAI 562
            ||.|.|....:.|||.: :..|.     ||....|..|:..:....||:|      ..:..:|..
 Frog    15 ESGISANDLFDGDSLDIGLIAPT-----PLPAIQQAVSISGSGISKENEA------SVLKQEPLA 68

  Fly   563 PPQPAI----PPAPAYCMANK--TMDTGMSSVVQMANNPLASTQHHALPQVPIVTRLKVDQGEDV 621
            ....|:    ||:....:.|:  .:.|..:::|...|.|:.:|:     |...||::        
 Frog    69 TSASALLNVRPPSTTTFVLNQINQLPTLGNTIVMTKNTPVTTTR-----QTITVTKI-------- 120

  Fly   622 SVKFTTGLDGLITNVQLLPSTMAMGQPTVKAT--ELESFTAQQLNMLLQSG--HPYLSL-PMTNS 681
                      |.||....|||.|   |.|:.|  .:.|....||..||::.  :..:.| |.:|.
 Frog   121 ----------LQTNSTTRPSTAA---PVVQTTVAAVPSKDQIQLKDLLKTSSLNKLMKLKPPSNI 172

  Fly   682 GVPGAVLQETL--------QTKDAGFPS--------------------------------EQAVE 706
            ..|.|...:.|        .||.|..|:                                ::..|
 Frog   173 AQPVATAAKFLILSPKVVCPTKSADLPNGAKKDISKEVTRIWINEDIKMRSFSPTNKVPVKEDEE 237

  Fly   707 DEEVDYEEIGVADTFAAYWPSKLKFGRAHPDPVVETATLSSVELPNINYQLALPSKTTE--CLSA 769
            .||.|.:|:|.|:|:|.|.|.|||.|..||||||||::||||..|::.:|..:|.:|.:  .|||
 Frog   238 PEEEDEDEMGHAETYAEYMPIKLKVGLRHPDPVVETSSLSSVTPPDVWFQTTIPEETIDNGWLSA 302

  Fly   770 LQLEAVVYACQAHEQILPSGDRAGFLLGDGAGVGKGRTIAGIIFDNYLKGRKRALWVSVSSDLKF 834
            ||||||.||.|.||..||:|:|||||:|||||||||||||||||:|||..|||:||.|||:|||:
 Frog   303 LQLEAVTYAAQQHETFLPNGERAGFLIGDGAGVGKGRTIAGIIFENYLLSRKRSLWFSVSNDLKY 367

  Fly   835 DAERDLADIGAHEKIRVATINKFKYSPIDSEENENFKRGVIFCTYTALIGESMTTNSKYKTRFRQ 899
            ||||||.|||| :.|:|.::|||||..|.|:.|.:.|:||||.||::|||||. :..|||||.:|
 Frog   368 DAERDLRDIGA-KNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQ-SGGKYKTRLKQ 430

  Fly   900 LTNWLGKKFEGVIVFDECHKAKNLSLMNVGKSTKTGTTVLDLQKLLPNARVVYASATGASEPRNM 964
            |.:|.|:.|:||||||||||||||..:...|.||||..||:||..||.|||||||||||||||||
 Frog   431 LLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNM 495

  Fly   965 AYMVRLGLWGPGTAYPEFYEFVNAVEKRGIGAMEIVAMDMKLRGTYIARQLSFKDVSFRIEEVNM 1029
            |||.|||:||.||.:.||.:|:.|||:||:||||||||||||||.||||||||..|:|:||||.:
 Frog   496 AYMSRLGIWGEGTPFREFNDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVPL 560

  Fly  1030 SKEFRKSYNLSAELWADIHKKFQKACRLMCVENRVQKIITCQFWCAHQRFFKNLCIASKVNHVVK 1094
            ..::.|.||.|.:||....::||:|..|:..|.|::|.:..|||.|||||||.|||||||..||:
 Frog   561 GHDYVKMYNKSVKLWVLARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQ 625

  Fly  1095 MTRQATRMGKAVVIGLQSTGESRTLEHLERHHGKLNSFVSTAKMIIQSFVEKHFPAPKRDSFHHL 1159
            :.|:..:.||.||||||||||:||||.||...|:||.|||||:.::||.:|||||||.|.....|
 Frog   626 LAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTARGVLQSLIEKHFPAPDRKKLFSL 690

  Fly  1160 L----------NTGEFEPEARSRPPKQK------------KSKMNTDWVEDDMDAEAGESDIEMY 1202
            |          |:....|...|:..|:|            ||........|||.:|:..|:.:..
 Frog   691 LGIDLSAQSNNNSPRDSPSKDSKVKKRKGEELLREAKKPRKSGGLAGSSSDDMGSESDTSEKDAG 755

  Fly  1203 ERSCTAAVEKIKSG---------------------------QKRRGRPPKADKVEKITMQERILE 1240
            ..|  .:.:.:.||                           :|.:.:..|...::..::|..:|.
 Frog   756 SES--ESFKSVSSGDDDDFNPFRDESSEDEEDDPWLIRKDHKKNKHKKKKKKSIDPDSIQSALLA 818

  Fly  1241 HLCNNMREQDNE-------DESTNTS-----DNTKVKVN-ITERD-VERCINMREMLLEKIDVLG 1291
            ....:.|...:.       ..:|.||     :||.|..: :|.:| |||...|::.||:|::.|.
 Frog   819 SGLGSKRPSFSSVVKAAATSTTTTTSVPAPLNNTNVSNSCVTSQDAVERAQQMKKELLDKLENLA 883

  Fly  1292 RKLPPNTLDKLISELGGTNLVAEMTGRRGRVVRTEYDGYKYEPRCENDSTMDLVNYREKQRFMDG 1356
            ..|||||||:||.||||.:.|||||||:||||..:.....||.|.|.|..::::|..||||||||
 Frog   884 EALPPNTLDELIDELGGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDG 948

  Fly  1357 SKHVAIISEAASSGISLQSDKRVSNQRRRLHITLELPWSADRAIQQFGRTHRSNQVNAPEYVFVI 1421
            .|::||||||||||||||:|:|..|||||:|:||||||||||||||||||||||||.||||||:|
 Frog   949 EKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLI 1013

  Fly  1422 TDLAGERRFASTVAKRLESLGALTQGDRRATDARDLSQFNIDNSIGRSALENVMQQLTSNKPLDR 1486
            ::||||:||||.||||||||||||.||||||::||||:||.||..||:|||.||:.:.|   ||.
 Frog  1014 SELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVS---LDS 1075

  Fly  1487 SQV--PQSYKGNFIYDCCVAMAGVGMINVREENKVKVFTVEKDSNNISKFLNRILGCRVEVQNAL 1549
            ..|  |..:.|:|..|....:.|||:|||  |::..:.|::||.|||.||||||||..|..||||
 Frog  1076 PLVSPPPEFPGDFFKDVRQGLIGVGLINV--EDRSGILTLDKDYNNIGKFLNRILGMEVHQQNAL 1138

  Fly  1550 FKFFLDKMYSLIMQMKRTGRFDLGILDLDAHGASVKSIKLMRFIRKHATGTAATELHTVTVERGM 1614
            |::|.|.:.::|...|:.||:|:|||||.:....|:.....:|:....:.:...||:|::|||||
 Frog  1139 FQYFSDTLSAVIQNAKKNGRYDMGILDLGSGDEKVRKSDAKKFLTPGYSTSGHVELYTISVERGM 1203

  Fly  1615 SFETALAKYRKEGQYEHEGFYILQKRRQNKNSAILCLQAPSNSSDVSNGKINLQIYRPNTGPQVR 1679
            |:|.| .|...|.....:|||:..:.|.||.:.||.       .:::..|....:||||||.|::
 Frog  1204 SWEDA-TKIWAEQTGPDDGFYLSLQIRNNKKTGILV-------KEINPKKKLFLVYRPNTGKQLK 1260

  Fly  1680 LETHASISSRYVKVSPEEAQTYWVQQYELCLNMCSHLYWNRTC---PMPTGCEVGLRMRTYHVLS 1741
            |||...:..:|.||:.|:||::|.:||....::|:|.||...|   .:...||:|||.|||:||.
 Frog  1261 LETLLDLKKKYKKVTSEDAQSHWKEQYISSADICTHAYWRGNCKKASLGLVCEIGLRCRTYYVLC 1325

  Fly  1742 GLMLPIWDRIELIIVN-SGH--KIQIIRMKTDANKKIVGTVVPPAVYDDLVADLST 1794
            |.:|.:|.::|.::.: ||.  |:||:|::|:..::|||.::|......||..|||
 Frog  1326 GSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSSLVTLLST 1381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3491NP_609731.1 AAA_34 737..1038 CDD:464010 198/302 (66%)
Helicase_C_4 1297..1576 CDD:464009 174/280 (62%)
sbno1XP_017945924.1 AAA_34 268..570 CDD:464010 199/303 (66%)
Helicase_C_4 889..1165 CDD:464009 174/280 (62%)

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