DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and Frrs1

DIOPT Version :10

Sequence 1:NP_609710.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001385900.1 Gene:Frrs1 / 310810 RGDID:1306883 Length:592 Species:Rattus norvegicus


Alignment Length:154 Identity:50/154 - (32%)
Similarity:78/154 - (50%) Gaps:10/154 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRLLVLAACLAI-SVHAYSDGAPKAACRDLTPQHGAKLQVTKPPYSIS-GPSHVRSDQKLTLTLG 64
            |.|.||...|.| ||.||.:|....:|..:.|||....| :.|.:.|: .....:...::.:||.
  Rat     6 FTLSVLVCALLICSVTAYPNGRVARSCAGMIPQHNHSPQ-SDPVHKITVSQMKFKPGDQIKVTLS 69

  Fly    65 GDEFLGFMIQARDGQN---RVVGQFQVVDSVHSQTLDCSG-KDDTITHLSAQKGKPLTGITFDWI 125
            |..|.||:::||:.::   ..:|.|.::||..||.|.|.. :...::|.|:   ...|.|...|.
  Rat    70 GPPFRGFLLEARNAEDLSGPPIGTFTLIDSDSSQILTCEDVQGFAVSHTSS---SIKTEIKVYWN 131

  Fly   126 PPAGYKGNVKFMATVVQTGFVYWV 149
            .|:....:|:|:|||||...:|||
  Rat   132 APSSAPDHVQFLATVVQKYKIYWV 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_609710.1 Reeler 27..149 CDD:460411 37/126 (29%)
Frrs1NP_001385900.1 Reeler 32..155 CDD:460411 37/126 (29%)
DOMON_SDR_2_like 192..354 CDD:187686
Cyt_b561_FRRS1_like 320..533 CDD:176490
Blue background indicates that the domain is not in the aligned region.

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