DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and LOC108179096

DIOPT Version :10

Sequence 1:NP_609710.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_021327722.3 Gene:LOC108179096 / 108179096 -ID:- Length:433 Species:Danio rerio


Alignment Length:162 Identity:37/162 - (22%)
Similarity:60/162 - (37%) Gaps:34/162 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRLLVLAACLAISVHAYSDGA-PKAACRDLTPQHGAKLQ-------VTKPPYSISGPSHVRSDQK 58
            |.:|....|       ||||: ....|:::...||.:..       ...|...|...|.|.....
Zfish    14 FNMLKFICC-------YSDGSLLNDQCQNMDINHGVQASGQDSNPFTVVPDNVIVDSSQVGRSFT 71

  Fly    59 LTLTLGGDEFLGFMIQARDGQNRV-VGQFQVVDSVHSQTLDCSGK-----DDTITHLSAQKGKPL 117
            :||:.....|:|||:.||...:.: .|.|.|:|.:.| .|.|.|:     |:|          ..
Zfish    72 VTLSTSSGSFMGFMLDARQCDSCLPAGVFSVLDPMKS-LLICGGQAVAQPDNT----------DK 125

  Fly   118 TGITFDWIPPAGYKGNVKFMATVVQTGFVYWV 149
            ..:..:|.|..  .|...|.:..::....:|:
Zfish   126 NSVQVNWTPQT--TGQFFFRSAFIKDYSTFWL 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_609710.1 Reeler 27..149 CDD:460411 29/134 (22%)
LOC108179096XP_021327722.3 None

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