DRSC/TRiP Functional Genomics Resources

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Protein Alignment: l(2)34Fc and LOC108179094

Sequence 1:NP_001285930.1 Gene:l(2)34Fc FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_021327713.1 Gene:LOC108179094 ID: Length:546 Species:Danio rerio

Alignment Length:154 Identity:44/155 (28%)
Similarity:65/155 (42%) Gaps:17/155 (11%)


  Fly     4 LLVLAACLAISVHAYSDGAPKA-ACRDLTPQHG--AKLQVTKP----PYSIS-GPSHVRSDQKLT 60
            ||:....:...:..||||:... .|:.:...||  |..|.:.|    |.::: ..|.|.:...:|
Zfish     9 LLIFGFTMLKFICCYSDGSLLTDQCQSMAIDHGVQASGQDSNPFTVIPDNVTVNSSQVGTGITVT 73

  Fly    61 LTLGGDEFLGFMIQARDGQN-RVVGQFQVVDSVHSQTLDCSGKDDTITHLSAQKGKPLTGITFDW 124
            |:.....|||:|::||:..| ...|.|..:||.:|..| |.  |..:.|   ......|.:...|
Zfish    74 LSTSSVPFLGYMLEARECDNCPPAGTFSGIDSANSLLL-CG--DQAVAH---PNNNDKTSVLVTW 132

  Fly   125 IPPAGYKGNVKFMATVVQTGFVYW 148
            .|.|  .|...|.|..|||....|
Zfish   133 TPQA--TGQFYFRAAFVQTFSFGW 154

Known Domains:


GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_001285930.1 Reeler 27..149 CDD:280232 38/131 (29%)
LOC108179094XP_021327713.1 Reeler 33..151 CDD:307916 37/126 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 D1223313at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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