DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and si:ch73-196i15.3

DIOPT Version :10

Sequence 1:NP_609710.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001315196.1 Gene:si:ch73-196i15.3 / 108004537 ZFINID:ZDB-GENE-091116-4 Length:270 Species:Danio rerio


Alignment Length:155 Identity:43/155 - (27%)
Similarity:67/155 - (43%) Gaps:20/155 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLAACLAISVHAYSDGAPKA-ACRDLTPQHGAKLQ-------VTKPPYSISGPSHVRSDQKLT 60
            ||:....:...:..||||:... .|:.:...|||:..       ...|.|.|...|.|.:...:|
Zfish     9 LLIFGFTMLRFICCYSDGSLLTDHCQSMAIDHGAQASGQDSNPFTVAPDYVIVDSSQVGTGITVT 73

  Fly    61 LTLGGDEFLGFMIQARDGQN-RVVGQFQVVDSVHSQTLDCSGKDDTITH-LSAQKGKPLTGITFD 123
            |:.....|:|||::||:..: ...|.|.|:|  .:..|.|||:  .:.| ||:.|    :.:...
Zfish    74 LSASSGSFMGFMLEARECDDCPPAGSFSVLD--FNSLLLCSGQ--VVAHSLSSDK----SSVQVT 130

  Fly   124 WIPPAGYKGNVKFMATVVQTGFVYW 148
            |.|.|  .|...|.|..|:....:|
Zfish   131 WTPQA--TGQFFFRAAFVKNFIEFW 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_609710.1 Reeler 27..149 CDD:460411 37/131 (28%)
si:ch73-196i15.3NP_001315196.1 Reeler 33..154 CDD:460411 37/131 (28%)

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