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Protein Alignment l(2)34Fc and si:ch73-196i15.3
DIOPT Version :9
| Sequence 1: | NP_001285930.1 |
Gene: | l(2)34Fc / 34838 |
FlyBaseID: | FBgn0261534 |
Length: | 159 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001315196.1 |
Gene: | si:ch73-196i15.3 / 108004537 |
ZFINID: | ZDB-GENE-091116-4 |
Length: | 270 |
Species: | Danio rerio |
| Alignment Length: | 155 |
Identity: | 43/155 - (27%) |
| Similarity: | 67/155 - (43%) |
Gaps: | 20/155 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 4 LLVLAACLAISVHAYSDGAPKA-ACRDLTPQHGAKLQ-------VTKPPYSISGPSHVRSDQKLT 60
||:....:...:..||||:... .|:.:...|||:.. ...|.|.|...|.|.:...:|
Zfish 9 LLIFGFTMLRFICCYSDGSLLTDHCQSMAIDHGAQASGQDSNPFTVAPDYVIVDSSQVGTGITVT 73
Fly 61 LTLGGDEFLGFMIQARDGQN-RVVGQFQVVDSVHSQTLDCSGKDDTITH-LSAQKGKPLTGITFD 123
|:.....|:|||::||:..: ...|.|.|:| .:..|.|||: .:.| ||:.| :.:...
Zfish 74 LSASSGSFMGFMLEARECDDCPPAGSFSVLD--FNSLLLCSGQ--VVAHSLSSDK----SSVQVT 130
Fly 124 WIPPAGYKGNVKFMATVVQTGFVYW 148
|.|.| .|...|.|..|:....:|
Zfish 131 WTPQA--TGQFFFRAAFVKNFIEFW 153
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| l(2)34Fc | NP_001285930.1 |
Reeler |
27..149 |
CDD:280232 |
37/131 (28%) |
| si:ch73-196i15.3 | NP_001315196.1 |
None |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
1 |
1.100 |
- |
- |
O |
PTHR45828 |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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