DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and si:ch73-196i15.5

DIOPT Version :10

Sequence 1:NP_609710.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001428727.1 Gene:si:ch73-196i15.5 / 100332242 ZFINID:ZDB-GENE-091118-32 Length:651 Species:Danio rerio


Alignment Length:160 Identity:41/160 - (25%)
Similarity:64/160 - (40%) Gaps:40/160 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLAACLAISVHAYSDGAPKA-ACRDLTPQHGAKLQVTKPP------YSISGPSHVRSDQK--- 58
            ||:....:...:..||||:... .|:.:...||     .:||      :|:. |.:|..|..   
Zfish     9 LLIFGFTMLRFIGCYSDGSLLTDQCQSMAIDHG-----VQPPGQDSIIFSVD-PDNVIVDSSQVG 67

  Fly    59 --LTLTLGGD-EFLGFMIQARDGQN-RVVGQFQVVDSVHS------QTLDCSGKDDTITHLSAQK 113
              :|:||... .|:|||::||:..: ...|.|.::|.|:|      |.:.....||.        
Zfish    68 TGITVTLSSSGSFMGFMLEARECDDCPPAGTFSLLDPVNSLLLCGDQAVAQPNNDDK-------- 124

  Fly   114 GKPLTGITFDWIPPAGYKGNVKFMATVVQT 143
                |.:...|.|.|  .|...|.|..||:
Zfish   125 ----TSVLVTWTPQA--TGQFYFRAAFVQS 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_609710.1 Reeler 27..149 CDD:460411 35/136 (26%)
si:ch73-196i15.5NP_001428727.1 None

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