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Protein Alignment l(2)34Fc and si:ch73-196i15.5
DIOPT Version :9
Sequence 1: | NP_001285930.1 |
Gene: | l(2)34Fc / 34838 |
FlyBaseID: | FBgn0261534 |
Length: | 159 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_021334085.1 |
Gene: | si:ch73-196i15.5 / 100332242 |
ZFINID: | ZDB-GENE-091118-32 |
Length: | 579 |
Species: | Danio rerio |
Alignment Length: | 160 |
Identity: | 41/160 - (25%) |
Similarity: | 64/160 - (40%) |
Gaps: | 40/160 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LLVLAACLAISVHAYSDGAPKA-ACRDLTPQHGAKLQVTKPP------YSISGPSHVRSDQK--- 58
||:....:...:..||||:... .|:.:...|| .:|| :|:. |.:|..|..
Zfish 9 LLIFGFTMLRFIGCYSDGSLLTDQCQSMAIDHG-----VQPPGQDSIIFSVD-PDNVIVDSSQVG 67
Fly 59 --LTLTLGGD-EFLGFMIQARDGQN-RVVGQFQVVDSVHS------QTLDCSGKDDTITHLSAQK 113
:|:||... .|:|||::||:..: ...|.|.::|.|:| |.:.....||.
Zfish 68 TGITVTLSSSGSFMGFMLEARECDDCPPAGTFSLLDPVNSLLLCGDQAVAQPNNDDK-------- 124
Fly 114 GKPLTGITFDWIPPAGYKGNVKFMATVVQT 143
|.:...|.|.| .|...|.|..||:
Zfish 125 ----TSVLVTWTPQA--TGQFYFRAAFVQS 148
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
l(2)34Fc | NP_001285930.1 |
Reeler |
27..149 |
CDD:280232 |
35/136 (26%) |
si:ch73-196i15.5 | XP_021334085.1 |
Reeler |
33..150 |
CDD:307916 |
35/136 (26%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR45828 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 2.010 |
|
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