DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and zgc:163022

DIOPT Version :10

Sequence 1:NP_609710.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:NP_001083026.2 Gene:zgc:163022 / 100038777 ZFINID:ZDB-GENE-070424-101 Length:570 Species:Danio rerio


Alignment Length:153 Identity:49/153 - (32%)
Similarity:78/153 - (50%) Gaps:12/153 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLVLAACLAISVHAYSDGAPKAACRDLTPQHGAKLQVTKPPYSISG--PSHVRSDQ-KLTL-TLG 64
            |.:|..|:.: |.:|.:|.....|..:.|.|||..|.:.||::::.  .:....|| |:|| :..
Zfish    12 LFILVLCVGL-VQSYKNGLVSEVCDSMMPNHGANAQTSSPPFTVTADKTTFKEGDQIKVTLNSQT 75

  Fly    65 GDEFLGFMIQARD-GQNRVVGQFQVVDSVHSQTLDCSGKDD-TITHLSAQKGKPLTGITFDW-IP 126
            |..|.|||:|||. |.:..:|.|.|..: :.|.|.|:|... .::|.|..|   .|.:...| .|
Zfish    76 GYYFEGFMLQARPVGSSSTIGTFSVTGN-NVQVLSCNGMPGRAVSHTSNAK---TTSVQVTWTAP 136

  Fly   127 PAGYKGNVKFMATVVQTGFVYWV 149
            .:|..||::|..|.|::...:||
Zfish   137 TSGQLGNIEFSVTFVKSTLTFWV 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_609710.1 Reeler 27..149 CDD:460411 41/128 (32%)
zgc:163022NP_001083026.2 Reeler 34..159 CDD:460411 41/128 (32%)
DOMON_SDR_2_like 186..343 CDD:187686
Cyt_b561_FRRS1_like 314..525 CDD:176490
Blue background indicates that the domain is not in the aligned region.

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