DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)34Fc and si:ch73-14h1.2

DIOPT Version :10

Sequence 1:NP_609710.1 Gene:l(2)34Fc / 34838 FlyBaseID:FBgn0261534 Length:159 Species:Drosophila melanogaster
Sequence 2:XP_003197897.2 Gene:si:ch73-14h1.2 / 100004603 ZFINID:ZDB-GENE-070912-263 Length:255 Species:Danio rerio


Alignment Length:154 Identity:51/154 - (33%)
Similarity:75/154 - (48%) Gaps:11/154 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FRLLVLAACLAISVHAYSDGAPKAACRDLTPQHGAKLQVTK--PPYSISGPSHVRSD-QKLTLTL 63
            |.|||....|. :|.||..|.....|..:.|.|......|.  .||:::......:| |.:|:||
Zfish     5 FVLLVFVLNLQ-AVTAYPHGRVSGVCSSMVPGHNGTYSSTNLDSPYTVTSDVLYYTDGQVITVTL 68

  Fly    64 GGD--EFLGFMIQARDGQNRVVGQFQVVDSVHSQTLDCSGKDDTITHLSAQKGKPLTGITFDWIP 126
            .|:  ||.||::|||:|. ..||.|.:|.: .||.|:|..:...::|.|:..   .:.:...|..
Zfish    69 QGNNTEFRGFLLQARNGM-EPVGTFTIVGN-SSQLLNCGTEGSAVSHNSSTL---KSTVVAQWNA 128

  Fly   127 PAGYKGNVKFMATVVQTGFVYWVG 150
            |.....:::|.||.||...|||||
Zfish   129 PNINNTDIQFRATFVQNFSVYWVG 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)34FcNP_609710.1 Reeler 27..149 CDD:460411 39/126 (31%)
si:ch73-14h1.2XP_003197897.2 Reeler 29..151 CDD:460411 39/126 (31%)

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