DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG46301 and nol4lb

DIOPT Version :10

Sequence 1:NP_001334737.1 Gene:CG46301 / 34829 FlyBaseID:FBgn0283651 Length:1237 Species:Drosophila melanogaster
Sequence 2:NP_001417770.1 Gene:nol4lb / 791170 ZFINID:ZDB-GENE-070112-1702 Length:703 Species:Danio rerio


Alignment Length:1190 Identity:302/1190 - (25%)
Similarity:423/1190 - (35%) Gaps:527/1190 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PTAEREIIYELFQPWALSTYGDQAKTKTITLRKKARILKALEGKE-------HSRPDSSKFRFWV 128
            |......::..||.|.|.||||..||||:|.||..:||:.|...:       .|...::||:|||
Zfish    16 PAVSEAEMFGDFQEWCLRTYGDSGKTKTVTRRKYNKILQTLLQSDDSEGVIIESNHINAKFKFWV 80

  Fly   129 KTKGFTTNRPEGFEEAPGSRRHLKNLPSSAILSDNPADVDLFAASTSKGFGRRTYRKVACVEEFF 193
            |:|||...|.|...|...:.|.:..:|..|...|.....|           ..:.::||.||:|:
Zfish    81 KSKGFQVGRSESENENGAADRPVLYVPIKATCVDGVLGPD-----------GSSLKRVAVVEDFY 134

  Fly   194 DIIYNVHMELG---GRSGMHAGQKRTYRIITETYAFLPREAVTRFLTICPECKKNLRPSSPSGGG 255
            ||||.:|:|:.   .::..|||||:||:.|.|||||||||||||||..|.||:|.:. .||||..
Zfish   135 DIIYAMHVEISSDPAKAPKHAGQKKTYKAIAETYAFLPREAVTRFLMSCGECQKRMH-ISPSGAE 198

  Fly   256 -KDSDLAGNESSSEVENYLNYSSH-TESSLEAGPTAKRRRHSSAEIKASLASGLAVGAGVASSMS 318
             |::    |:.||...:.::|:.. |.:.|:.........:...|                .|:|
Zfish   199 FKEN----NQPSSLAADLIDYNMPLTTTYLKQKKLQCMNNNEQDE----------------CSVS 243

  Fly   319 ATQLDVLWTGVPRSRSPKPPMAAEAAVETTPVSVPKIRIKTQLQRPSSPQDQSPADPNTDAQSQS 383
            :.:.|:                    .:.|.:|..:....:.|..|||      ||         
Zfish   244 SEEFDM--------------------SDPTWISAERHGTLSDLNHPSS------AD--------- 273

  Fly   384 QIQSQSQSQSQSQSQSHSQPSGQGFDAQLLKSRDNLLRYYNFMRRFYAGEPVLAPPIYGSSLLQS 448
            ::.|...:..:....|.|: ||.|                |.:|       .|.||..|::.:..
Zfish   274 RMHSPQNAHKEEDDDSSSE-SGSG----------------NGIR-------TLTPPSVGAAGVND 314

  Fly   449 LSYPTTISTA-----ATATPTTPTTTTSAPGKMLAPPKTATPPPNPPKIKTSPDSLLRARTPPVA 508
            .:.|.:.|.|     :||.|...:||:|                                     
Zfish   315 STGPGSGSYAEVNGNSTAAPLDFSTTSS------------------------------------- 342

  Fly   509 STATSAAPKDAAHTPINLTKSLFSSLKTGHAP-STSTPVPLKLELPSPPKPLPELRIPQLRGMPP 572
                |::.:|  ..|:||:..|..:|.|..|. :|.|           |:...|||    |..| 
Zfish   343 ----SSSSED--QQPVNLSDRLSQALPTAAAMLATFT-----------PEHTEELR----RKYP- 385

  Fly   573 VELSLPLPPLDLERLKPITSTYLQLTRSMGLSDEDALRFDNLETIPATPVVSTDTASVVGVGVGG 637
                              .||.|:|.|.:.                                   
Zfish   386 ------------------KSTELRLDRDIR----------------------------------- 397

  Fly   638 GGGAAAGAGGGAGGAGGLLGDVVSGLGGGLVNESEAYAGLMKDADKLKLMLLAWNYQNSTAVRNG 702
                                                                  :|.|.:     
Zfish   398 ------------------------------------------------------DYNNKS----- 403

  Fly   703 TEGPDLSVVGGLWAQYQNALAQNAAAAAAASGKMDSSLSPVPRQDAHSPMETQDETNSSGQKEED 767
                         .||             :||..||....:..:|.     |...:.::...::|
Zfish   404 -------------PQY-------------SSGSYDSIKMEICAEDL-----TVGRSQAADDDDDD 437

  Fly   768 EVSEDDSDDKLDEKLATTHDPERLKAFNMFVRLFVDENLDRIIPISKQPKEKIQAIIDSCARQFP 832
            ....||| ||:::....  ||||||||||||||||||||||::||||||||||||||:||:||||
Zfish   438 HDDHDDS-DKINDVEGV--DPERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIESCSRQFP 499

  Fly   833 EFSDRSRKRIRTYLKSCRRNKKTRDGWENTTRPTPAHLTSVQAEQILAIACENESMN-AKRMRIG 896
            ||.:|:|||||||||||||.||  :|.|  |||||.||||..||.|||.|||:||.. |||||:.
Zfish   500 EFQERARKRIRTYLKSCRRMKK--NGME--TRPTPPHLTSAMAENILAAACESESRKAAKRMRMD 560

  Fly   897 L-----EPITHAVPAPGSAVAAAAAAAAAAAVVAATSSSAGGTSTTAAGNATATCGMGGVGDATG 956
            :     ||:             :...|.:...|:.|.                            
Zfish   561 VYQAHEEPV-------------SLDKAVSREPVSLTH---------------------------- 584

  Fly   957 LTSAAAAALPFVSAVGFARSTPNSEHADVLPFGGAGTAGGSGGGGAGGGGGGGMSSARSSPLALS 1021
                        ||...|.|..:.:...:           :||......|.||:.::...|:.|:
Zfish   585 ------------SAYSLAASAYSQDQLYI-----------NGGLNYSYRGYGGLCASMQHPVTLN 626

  Fly  1022 SNASVSGGASVTGLTLANGAGASNGAGLPASSPYTTDFSSPSTASPFVAAAAAVAAGRAPSYPGY 1086
            :..:.:.|                                                         
Zfish   627 TATAQTNG--------------------------------------------------------- 634

  Fly  1087 FPAVAGLGNVTPTDLSMKPTSGLGGNMVSNNNSNSSVTGNINSQLSAANLASLSNASNNNALVTA 1151
                       |||||||       ::.||::|:||                 |:...|      
Zfish   635 -----------PTDLSMK-------SLASNSSSSSS-----------------SSLGRN------ 658

  Fly  1152 TQQLQQLQQQQQQQQQQQQQQQQQQLLVAGGGGMDGQSVRAPPILPHKLSANEVTAARQVISAYR 1216
                                          |||...|           ||..||.|.||:|:.||
Zfish   659 ------------------------------GGGASTQ-----------LSHTEVAAVRQLIAGYR 682

  Fly  1217 ESAAFLLRTADQVEQLLVQQ 1236
            ||||||||:||::|.|::||
Zfish   683 ESAAFLLRSADELENLILQQ 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG46301NP_001334737.1 Integrase_H2C2 194..245 CDD:465569 32/53 (60%)
nol4lbNP_001417770.1 Integrase_H2C2 <154..189 CDD:465569 26/34 (76%)

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