DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18095 and kera

DIOPT Version :10

Sequence 1:NP_001188805.1 Gene:CG18095 / 34823 FlyBaseID:FBgn0028872 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001020719.1 Gene:kera / 567017 ZFINID:ZDB-GENE-041210-165 Length:348 Species:Danio rerio


Alignment Length:270 Identity:76/270 - (28%)
Similarity:127/270 - (47%) Gaps:38/270 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 LDLSHNMLSKLSVKSFEQYPQLQQLDLRYNRISQ--IENDSFDGLSHLKHLYLNGNQLAHIDGSF 178
            |.|.:|::..||..:.....||:.::|..|:|:.  :|.|:...:|:|.|||:..|.|:.|....
Zfish    75 LYLQNNLIDVLSANALRNATQLKWINLNRNKITTEGLEVDALRAMSNLVHLYMEDNLLSSIPSPL 139

  Fly   179 FRGLHRLSSLSLQHNRIEFIEMDSFESNTHLRSLRLDQNLL--SSLQFLSQRGLARLVHLNLSSN 241
               ..:|..|.|..|:|..|....|....||..|.|..|.|  .::..:|.:||..|:.:||:.|
Zfish   140 ---PAKLEQLRLSRNKISKIPPGVFSGMGHLTLLDLQSNKLQDDAVTEVSLKGLNNLIQINLAKN 201

  Fly   242 LLQKLE---PFVFSKNFELQDLDLSYNNITKLNKEALSGLDSLERLNISHNYVDKIYD----ESL 299
            .|..:.   |...::.|      |..|||.|:..|...||..:..|.::.|   |:.:    :::
Zfish   202 QLNSMPLGLPPTTTQIF------LDGNNIEKIPAEYFKGLPKVASLRLNRN---KLANGGIPKNV 257

  Fly   300 DSLIALLQLDISFNLLTTLPDNLFHFNTQLEEIILANNKIEEISS-----------QMMFNQNHL 353
            .:|.::|.|.:|.|.||.:|    ..::.||.:.|.:|||:.::|           .:......|
Zfish   258 FNLSSILDLQLSHNQLTEVP----VISSGLEHLHLDHNKIKSVNSSDICPPGVLDDHLEEKSPRL 318

  Fly   354 RYIKLSGNAI 363
            ||::|.||.|
Zfish   319 RYLRLDGNEI 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18095NP_001188805.1 LRR 22..>338 CDD:443914 65/232 (28%)
leucine-rich repeat 41..64 CDD:275380
leucine-rich repeat 65..88 CDD:275380
leucine-rich repeat 89..112 CDD:275380
leucine-rich repeat 113..136 CDD:275380 5/19 (26%)
leucine-rich repeat 137..160 CDD:275380 6/24 (25%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..232 CDD:275380 8/24 (33%)
leucine-rich repeat 233..256 CDD:275380 6/25 (24%)
leucine-rich repeat 257..280 CDD:275380 8/22 (36%)
leucine-rich repeat 281..304 CDD:275380 4/26 (15%)
leucine-rich repeat 305..328 CDD:275380 7/22 (32%)
keraNP_001020719.1 LRRNT 40..74 CDD:214470
LRR 1. /evidence=ECO:0000255 70..92 5/16 (31%)
leucine-rich repeat 72..95 CDD:275380 5/19 (26%)
LRR <74..>297 CDD:443914 68/237 (29%)
LRR 2. /evidence=ECO:0000255 93..118 7/24 (29%)
leucine-rich repeat 96..121 CDD:275380 6/24 (25%)
LRR 3. /evidence=ECO:0000255 119..140 8/23 (35%)
leucine-rich repeat 122..142 CDD:275380 7/22 (32%)
LRR 4. /evidence=ECO:0000255 141..163 7/21 (33%)
leucine-rich repeat 143..166 CDD:275380 7/22 (32%)
LRR 5. /evidence=ECO:0000255 165..189 7/23 (30%)
leucine-rich repeat 167..192 CDD:275380 8/24 (33%)
LRR 6. /evidence=ECO:0000255 190..213 7/22 (32%)
leucine-rich repeat 193..216 CDD:275380 6/22 (27%)
LRR 7. /evidence=ECO:0000255 215..234 7/24 (29%)
leucine-rich repeat 217..237 CDD:275380 9/25 (36%)
LRR 8. /evidence=ECO:0000255 235..260 4/27 (15%)
leucine-rich repeat 238..262 CDD:275380 4/26 (15%)
LRR 9. /evidence=ECO:0000255 262..280 7/21 (33%)
LRR 10. /evidence=ECO:0000255 281..303 7/21 (33%)
leucine-rich repeat 318..339 CDD:275380 7/11 (64%)
Blue background indicates that the domain is not in the aligned region.

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