DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and FLRT1

DIOPT Version :10

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:NP_037412.2 Gene:FLRT1 / 23769 HGNCID:3760 Length:674 Species:Homo sapiens


Alignment Length:681 Identity:151/681 - (22%)
Similarity:254/681 - (37%) Gaps:173/681 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 ITVNRTSKSASVTPTG-IRENVMLPSADPEKEAQILYEKSLQEYHGSQLSTASTATDVIAGKRTL 140
            :.|...:.:|:.|||. :...|::.:|..:          |:::........:..|:|| ...|.
Human     1 MVVAHPTATATTTPTATVTATVVMTTATMD----------LRDWLFLCYGLIAFLTEVI-DSTTC 54

  Fly   141 HSICERWLQKHCHCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNL----------TKLE 195
            .|:        |.|....    :.|...|:.::|.::|::...|.|.||.:          ||:.
Human    55 PSV--------CRCDNGF----IYCNDRGLTSIPADIPDDATTLYLQNNQINNAGIPQDLKTKVN 107

  Fly   196 ANSFFMAPN------------LEELTLSDNSIINMDPNAFYGLAKLKRLSLQNCGLK--SLPPQS 246
            ....::..|            |.||.|.||::..:..::...:..|::|.|.:..:.  |:...:
Human   108 VQVIYLYENDLDEFPINLPRSLRELHLQDNNVRTIARDSLARIPLLEKLHLDDNSVSTVSIEEDA 172

  Fly   247 FQGLAQLTSLQLNGNALVSLDGDCLGHLQKLRTLRLEGNLFYRIPTNALAGLRTLEALNLGSNLL 311
            |....||..|.|:.|.|.|:..   |....|..|||:.|....||.:|..||.:|..|.|..|||
Human   173 FADSKQLKLLFLSRNHLSSIPS---GLPHTLEELRLDDNRISTIPLHAFKGLNSLRRLVLDGNLL 234

  Fly   312 T--IINDEDFPRMPNLIVLLLKRNQIMKISAGALKNLTA--LKVLELDDNLISSLP-EGLSKLSQ 371
            .  .|.|:.|.|:.||..|.|.||.:    |....||.:  |:.|.|.||.||.:| ..|:|:.:
Human   235 ANQRIADDTFSRLQNLTELSLVRNSL----AAPPLNLPSAHLQKLYLQDNAISHIPYNTLAKMRE 295

  Fly   372 LQELSITSNRLRWINDTELPRSMQMLDMRANPLSTISPGAFRGMSKLRKLILSDVRTLRSFPELE 436
            |:.|.:::|.|     |.|||                 |.|..:..|.:|:      ||:.|...
Human   296 LERLDLSNNNL-----TTLPR-----------------GLFDDLGNLAQLL------LRNNPWFC 332

  Fly   437 ACHAL---EILKLDRAGIQEVPANLCRQTPRLKSLELKTNSLKRIPNLSSCRDLRLLDLSSNQIE 498
            .|:.:   :.:|. ||.:..|...:|:...:::.:.:|                   |::|...|
Human   333 GCNLMWLRDWVKA-RAAVVNVRGLMCQGPEKVRGMAIK-------------------DITSEMDE 377

  Fly   499 KIQGKPFNGLKQLNDLLLSYNRIKA-LPQDAFQGI----PKLQLLDLEGNEISYIHKEAFSGFTA 558
            ..:..|..|:........:.|...| .||.:...:    |.|:|.|                   
Human   378 CFETGPQGGVANAAAKTTASNHASATTPQGSLFTLKAKRPGLRLPD------------------- 423

  Fly   559 LEDLNLGNNI-FPELPESGLRAL-LHLKTFNNPKLR----EFPPPDTFPRIQTLILSYAYHCCAF 617
                   :|| :|.....|.:.| :|:|......:|    ...|..:| |:..|.|.::      
Human   424 -------SNIDYPMATGDGAKTLAIHVKALTADSIRITWKATLPASSF-RLSWLRLGHS------ 474

  Fly   618 LPLVAMSSQ-----KKTSQVQEAVLFPSDAEFDMTLWNNSMMNIWPQMHNLSKQLGASMHDPWET 677
             |.|...::     .||..:..|:...|.....|.....|...:..:....:|...|..:.|..|
Human   475 -PAVGSITETLVQGDKTEYLLTALEPKSTYIICMVTMETSNAYVADETPVCAKAETADSYGPTTT 538

  Fly   678 AINFNEEQ---------LQTQTGGQIATSYM 699
               .|:||         |....||.:|..::
Human   539 ---LNQEQNAGPMASLPLAGIIGGAVALVFL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 LRR <157..390 CDD:443914 74/261 (28%)
leucine-rich repeat 158..179 CDD:275380 3/20 (15%)
leucine-rich repeat 183..204 CDD:275380 6/30 (20%)
leucine-rich repeat 205..228 CDD:275380 6/22 (27%)
leucine-rich repeat 229..252 CDD:275380 5/24 (21%)
leucine-rich repeat 253..276 CDD:275380 7/22 (32%)
leucine-rich repeat 277..300 CDD:275380 10/22 (45%)
LRR 292..612 CDD:443914 80/338 (24%)
leucine-rich repeat 301..324 CDD:275380 10/24 (42%)
leucine-rich repeat 325..348 CDD:275380 8/22 (36%)
leucine-rich repeat 349..371 CDD:275380 10/22 (45%)
leucine-rich repeat 372..393 CDD:275380 7/20 (35%)
leucine-rich repeat 394..415 CDD:275380 2/20 (10%)
leucine-rich repeat 418..486 CDD:275380 12/70 (17%)
leucine-rich repeat 441..464 CDD:275378 5/25 (20%)
leucine-rich repeat 487..510 CDD:275380 5/22 (23%)
leucine-rich repeat 511..534 CDD:275380 4/27 (15%)
leucine-rich repeat 535..558 CDD:275380 3/22 (14%)
leucine-rich repeat 559..580 CDD:275380 4/21 (19%)
7tmA_Glyco_hormone_R 754..1028 CDD:320264
TM helix 1 755..781 CDD:320264
TM helix 2 788..813 CDD:320264
TM helix 3 833..863 CDD:320264
TM helix 4 875..897 CDD:320264
TM helix 5 918..947 CDD:320264
TM helix 6 956..986 CDD:320264
TM helix 7 996..1021 CDD:320264
FLRT1NP_037412.2 LRRNT 54..84 CDD:214470 7/41 (17%)
LRR 1 82..103 4/20 (20%)
LRR <84..331 CDD:443914 80/281 (28%)
LRR 2 107..127 1/19 (5%)
leucine-rich repeat 108..128 CDD:275380 1/19 (5%)
LRR 3 128..149 6/20 (30%)
leucine-rich repeat 129..152 CDD:275380 6/22 (27%)
LRR 4 152..173 4/20 (20%)
leucine-rich repeat 153..178 CDD:275380 5/24 (21%)
LRR 5 178..199 8/23 (35%)
leucine-rich repeat 179..199 CDD:275380 7/22 (32%)
leucine-rich repeat 200..223 CDD:275380 10/22 (45%)
LRR 6 200..220 8/19 (42%)
LRR 7 223..246 9/22 (41%)
leucine-rich repeat 224..249 CDD:275380 10/24 (42%)
LRR 8 249..269 9/23 (39%)
leucine-rich repeat 250..271 CDD:275380 8/24 (33%)
LRR 9 271..292 9/20 (45%)
leucine-rich repeat 272..295 CDD:275380 10/22 (45%)
LRR 10 295..316 10/42 (24%)
leucine-rich repeat 296..319 CDD:275380 10/44 (23%)
PCC 300..>406 CDD:188093 27/153 (18%)
FN3 441..505 CDD:214495 14/71 (20%)
Blue background indicates that the domain is not in the aligned region.

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