DRSC/TRiP Functional Genomics Resources

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Protein Alignment rk and LOC100332583

DIOPT Version :9

Sequence 1:NP_476702.1 Gene:rk / 34819 FlyBaseID:FBgn0003255 Length:1360 Species:Drosophila melanogaster
Sequence 2:XP_002665954.4 Gene:LOC100332583 / 100332583 -ID:- Length:1019 Species:Danio rerio


Alignment Length:905 Identity:204/905 - (22%)
Similarity:332/905 - (36%) Gaps:233/905 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 HCTGSLEVLRLSCRGIGILAVPVNLPNEVVVLDLGNNNLTKLEANSFFMAPNLEELT------LS 211
            |...:.|.:.::|:|..:..:|..|.| ...:||..|.:..|...||.   .||.||      |:
Zfish    35 HENVTAETVVVNCQGRKLKVLPQFLAN-TTYIDLSENYIRNLTLQSFH---GLENLTLLNLKWLN 95

  Fly   212 DNSIINMDPNAFYGLAKLKRLSLQNCGLKSLP---PQSFQGLAQLTSLQLNGNALVSLDGDCLGH 273
            .|..:.:....|..|.||:.|.|....||.:|   |::      |..|.|..|.:..::.....|
Zfish    96 QNREVVIAKGVFSNLTKLQVLDLNGIKLKYIPKDIPKN------LKELGLEENKITWINLTTFEH 154

  Fly   274 LQKLRTLRLEGNLF--------YRIPTNALA--------------------GLR-TLEALNLGSN 309
            ::.|..|.|..|.:        |||...:|:                    ||. :||.|.||||
Zfish   155 VKNLSFLYLSKNCYYWNPCSRRYRIEKGSLSYLVNLKRLTLSFNNLTQVPIGLPVSLERLELGSN 219

  Fly   310 LLTIINDEDFPRMPNLIVLLLK----------------RNQIMKISAGALKNLTALKVLELDDNL 358
            .||.|.:.||..:.||.||.::                :|..::|...|..:|..|.:|.|..|.
Zfish   220 SLTYIGEHDFRGLCNLTVLKIQGNCPRCHTAPYPCIPCKNTSIEIHPQAFSDLKNLHILHLAGNS 284

  Fly   359 ISSL-PEGLSKLSQLQELSITSNRL-RWINDT-------ELPRSMQMLDMRAN------PLSTI- 407
            |.|: |...:.||.||:|.::.|.| ..|.|.       .|| .:..||:..|      ||:.: 
Zfish   285 IKSINPAWFANLSNLQQLFLSFNLLFSAITDPADTVFLGNLP-LLTKLDLSYNFALKTYPLTVVL 348

  Fly   408 SPGAFRGMSK-----LRKLILSDVR--TLRSFPELEACHALE------------------ILKLD 447
            ||| |..::.     ||.|:..:::  |.:|..:|:..:.|:                  :|.|.
Zfish   349 SPG-FANLTSLKTLHLRGLVFREIQKDTFKSLFDLQHLNVLDVGINFIVRATSYIFQHVRVLYLA 412

  Fly   448 RAGIQEVPAN--LCRQT----------PRLKSLELKTNSLKRIPNLSSCRDLRLLDLSSNQIEKI 500
            ...:..|..|  |.:.|          |.:.......::.|.:..|......|:||||.|.:..|
Zfish   413 ENRLYPVTVNGELSKATGAGSNHRSIMPLMSEPLYPFDAPKNLVKLECYNTGRVLDLSRNNLFLI 477

  Fly   501 QGKPFNGLKQLNDLLLSYNRIKALPQDA-FQGIPKLQLLDLEGNEISYIHKEAFSGFTALEDLNL 564
            ..:.|:....::.|.||.|.....|..: |..:|.|:.|||..|::...:..||....:||.|::
Zfish   478 SPEQFDTYGNISCLNLSRNGFSTAPNGSEFTSLPNLKYLDLSFNKVDLAYDNAFRELQSLEVLDI 542

  Fly   565 GNN--------------IFPELPESGLRAL---------LHLKTFNNPKLREF------------ 594
            ..|              ....||  .|:.|         |..||.::..|||.            
Zfish   543 SYNSHYFTVAGVTHNMMFLQYLP--SLKVLNMSFNSINTLTTKTMSSKSLRELQFRGNKLGRMWR 605

  Fly   595 PPPDTFPRI-----QTLILSYAYHCCAFLPLVAMSSQKKTSQVQEAVLFPSDAEFDMTLWNNSMM 654
            ...:|:.:|     ....|..:.:....:|....:....|.|             .:.:.:|.:.
Zfish   606 DKDNTYVKIFKNFTNLTHLDISNNSIGKIPYTVYTQLPITIQ-------------RLQMSHNQLA 657

  Fly   655 NI-WPQMHNLSKQLGASMHDP--WETAINFNEE-------QLQTQTGGQIATSYMEEY--FEEHD 707
            || |..:..........:||.  .|.|.|.:.:       .||.....::|..:::..  .:|.|
Zfish   658 NINWTMLRRFQNLRELILHDNNIIEIASNLSVDVPSLELLNLQRNRISKLAIGFLQGVVNLKELD 722

  Fly   708 VSGPATGYGF-GTGLFSGMSTEDFQPGSVQCLPMPG-PFLPCADLFDW--WTLRCGVWVVFLLSL 768
            :|     |.: .|...|...||    ..::.|.:.| ||....:|.::  |.|...|.:..|::.
Zfish   723 LS-----YNYLITVNQSTFPTE----SDLKMLWLHGNPFHCTCNLLEFVLWILDTNVKIPRLVTG 778

  Fly   769 L-------GNGTVVFVLLCSRSKMDVPRFLVCNLAAADFFMGIYLGILAIVDAATLGEFRMFAIP 826
            :       ..|..|.       |.|:...:...||...:|:.     .|.:...|.....|....
Zfish   779 VTCTMPEERKGLAVI-------KFDIQECIDDQLAFVAYFIS-----AACIICTTFAAITMHLFY 831

  Fly   827 WQMSVL-----CQLSGFLAVLSSELSVYTLAVITLE------RNYAITH-AIHLNKRLSL 874
            |.:|.|     .:.:|: ..||||..:|. |.||.:      .::.:.| .:.|.:|..|
Zfish   832 WDVSYLYYYLKARFTGY-QQLSSESCIYD-AFITYDTKDPQVSDWVLNHLRVQLEERSEL 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rkNP_476702.1 leucine-rich repeat 158..179 CDD:275380 5/20 (25%)
LRR_RI 180..>383 CDD:238064 71/258 (28%)
leucine-rich repeat 183..204 CDD:275380 6/20 (30%)
LRR_8 203..263 CDD:290566 20/68 (29%)
leucine-rich repeat 205..228 CDD:275380 8/28 (29%)
leucine-rich repeat 229..252 CDD:275380 7/25 (28%)
LRR_8 252..311 CDD:290566 22/87 (25%)
leucine-rich repeat 253..276 CDD:275380 5/22 (23%)
leucine-rich repeat 277..300 CDD:275380 10/51 (20%)
LRR_8 299..359 CDD:290566 24/76 (32%)
leucine-rich repeat 301..324 CDD:275380 12/22 (55%)
leucine-rich repeat 325..348 CDD:275380 7/38 (18%)
LRR_RI 327..567 CDD:238064 74/309 (24%)
leucine-rich repeat 349..371 CDD:275380 8/22 (36%)
LRR_8 370..425 CDD:290566 22/74 (30%)
leucine-rich repeat 372..393 CDD:275380 9/28 (32%)
leucine-rich repeat 394..415 CDD:275380 9/27 (33%)
leucine-rich repeat 418..486 CDD:275380 16/99 (16%)
leucine-rich repeat 441..464 CDD:275378 7/52 (13%)
LRR_8 487..545 CDD:290566 20/58 (34%)
leucine-rich repeat 487..510 CDD:275380 8/22 (36%)
leucine-rich repeat 511..534 CDD:275380 6/23 (26%)
LRR_8 533..589 CDD:290566 19/78 (24%)
leucine-rich repeat 535..558 CDD:275380 7/22 (32%)
leucine-rich repeat 559..580 CDD:275380 7/34 (21%)
7tm_4 764..>892 CDD:304433 27/130 (21%)
7tm_1 770..1017 CDD:278431 26/117 (22%)
LOC100332583XP_002665954.4 LRR_RI 27..226 CDD:238064 54/200 (27%)
LRR_8 61..120 CDD:290566 19/62 (31%)
leucine-rich repeat 62..85 CDD:275380 7/25 (28%)
leucine-rich repeat 86..112 CDD:275380 6/25 (24%)
leucine-rich repeat 113..133 CDD:275380 7/19 (37%)
LRR_8 132..200 CDD:290566 13/73 (18%)
leucine-rich repeat 134..157 CDD:275380 5/22 (23%)
leucine-rich repeat 158..189 CDD:275380 8/30 (27%)
leucine-rich repeat 190..210 CDD:275380 2/19 (11%)
LRR 192..587 CDD:227223 98/398 (25%)
leucine-rich repeat 211..234 CDD:275380 12/22 (55%)
leucine-rich repeat 235..274 CDD:275380 7/38 (18%)
leucine-rich repeat 275..296 CDD:275380 7/20 (35%)
leucine-rich repeat 299..327 CDD:275380 9/28 (32%)
leucine-rich repeat 328..355 CDD:275380 9/27 (33%)
leucine-rich repeat 358..457 CDD:275380 15/98 (15%)
leucine-rich repeat 385..405 CDD:275378 1/19 (5%)
leucine-rich repeat 465..487 CDD:275380 8/21 (38%)
LRR_RI <487..728 CDD:238064 50/260 (19%)
leucine-rich repeat 491..512 CDD:275380 6/20 (30%)
leucine-rich repeat 513..536 CDD:275380 7/22 (32%)
leucine-rich repeat 537..566 CDD:275380 6/30 (20%)
leucine-rich repeat 567..589 CDD:275380 5/21 (24%)
leucine-rich repeat 590..620 CDD:275380 5/29 (17%)
leucine-rich repeat 621..645 CDD:275380 2/23 (9%)
leucine-rich repeat 646..669 CDD:275380 5/35 (14%)
LRR_8 647..704 CDD:290566 12/69 (17%)
leucine-rich repeat 670..693 CDD:275380 5/22 (23%)
LRR_8 692..752 CDD:290566 13/68 (19%)
leucine-rich repeat 694..717 CDD:275380 3/22 (14%)
leucine-rich repeat 718..736 CDD:275380 6/22 (27%)
TPKR_C2 750..>789 CDD:301599 7/38 (18%)
TIR 858..1000 CDD:214587 8/33 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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