DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and SCARF2

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:XP_047297541.1 Gene:SCARF2 / 91179 HGNCID:19869 Length:904 Species:Homo sapiens


Alignment Length:457 Identity:114/457 - (24%)
Similarity:151/457 - (33%) Gaps:160/457 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 RTVMRPSCCEGYEGSVENCK-PVC--RQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNE 138
            |:...|:||.|:....:.|. .||  ...|.::..|..|..|.|..||.|.:|...||     .:
Human    95 RSSQVPTCCAGWRQQGDECGIAVCEGNSTCSENEVCVRPGECRCRHGYFGANCDTKCP-----RQ 154

  Fly   139 FC--DRPGVCSCQNGYKRTSPSDNCLPV--------------CEKECG-HHSFC-SEPGKCECEP 185
            |.  |...:|||.       |...|..|              ||..|. .|..| ...|.|.|||
Human   155 FWGPDCKELCSCH-------PHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSGACRCEP 212

  Fly   186 GYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRC-VRPGVCECENGYAGDDGGTNCRPVCST 249
            |:                ....|:..|  .|...||| .:.|.|.|..|:.|......|  .|::
Human   213 GW----------------WGAQCASAC--YCSATSRCDPQTGACLCHAGWWGRSCNNQC--ACNS 257

  Fly   250 CP---ENGLCLS-----------------------PGVCVCKPGYVMRNDLCQP----------- 277
            .|   ::|.|..                       .|.|.|:|||  |...|:.           
Human   258 SPCEQQSGRCQCRERTFGARCDRYCQCFRGRCHPVDGTCACEPGY--RGKYCREPCPAGFYGLGC 320

  Fly   278 --HCEKCSDNAHC-VAPNQC-ECFPGYESSGADKKCVPKCSKGCTNGFCFAPETCVCSIGYQMGP 338
              .|.:|.....| ||..:| .|.||:..:        ||.:.|..||            |..|.
Human   321 RRRCGQCKGQQPCTVAEGRCLTCEPGWNGT--------KCDQPCATGF------------YGEGC 365

  Fly   339 NQVCEPKC----SLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSG------------CSN 387
            :..| |.|    :.|.|.||||     .|:.|:     ....|:..|.:|            |.:
Human   366 SHRC-PPCRDGHACNHVTGKCT-----RCNAGW-----IGDRCETKCSNGTYGEDCAFVCADCGS 419

  Fly   388 GHCVAPNF----CICHDGYQLNSTNPVTSMCQPICKGCQFGDCVAPNVCECNVG-YENINGLCEL 447
            |||   :|    |:|..|......| ||  |.|   |....||.  ..|.|:.. .:.:.|.|.|
Human   420 GHC---DFQSGRCLCSPGVHGPHCN-VT--CPP---GLHGADCA--QACSCHEDTCDPVTGACHL 473

  Fly   448 QT 449
            :|
Human   474 ET 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
SCARF2XP_047297541.1 PHA03247 <567..904 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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