DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and Megf10

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001001979.1 Gene:Megf10 / 70417 MGIID:2685177 Length:1147 Species:Mus musculus


Alignment Length:920 Identity:214/920 - (23%)
Similarity:291/920 - (31%) Gaps:361/920 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LHFVCLSLS--FGTSFAILRHGLNDCSHPESVPYNRKVLKSKLVPFQQYSY-----FHGWVTKYR 65
            |..:|..|.  .||:.::.....|.|||.||  |:..|.:|...||.|..|     ...|....|
Mouse     9 LGLICSLLCHWVGTASSLNLEDPNVCSHWES--YSVTVQESYPHPFDQIYYTSCTDILNWFKCTR 71

  Fly    66 HQYVYEDETAYR----TVMR--PSCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGI 124
            |:..|  .||||    |:.|  ..||.|:..|.:.|.|.|..:| .||.|.:||||.|..|:||.
Mouse    72 HRISY--RTAYRHGEKTMYRRKSQCCPGFYESRDMCVPHCADKC-VHGRCIAPNTCQCEPGWGGT 133

  Fly   125 DCH---------PVCPTVCG-KNEFCDRP--GVCSCQNGYKRTSPSDNCLP-----VCEK--ECG 170
            :|.         |.|.:.|. ||.....|  |.|.|..||:.....|.|..     .|.:  :|.
Mouse   134 NCSSACDGDHWGPHCSSRCQCKNRALCNPITGACHCAAGYRGWRCEDRCEQGTYGNDCHQRCQCQ 198

  Fly   171 HHSFCSE-PGKCECEPGYE-----------KVG----------NGTV---------FPDGYKNNS 204
            :.:.|.. .|:|.|.|||.           |.|          ||.|         .|.|:....
Mouse   199 NGATCDHITGECRCSPGYTGAFCEDLCPPGKHGPHCEQRCPCQNGGVCHHVTGECSCPSGWMGTV 263

  Fly   205 NGNCSPICP-----KDCGQNSRCVRPGVCE-------CENGYAGD---------DGGTNCRPVCS 248
               |...||     |:|.|..:|...|.|:       |..||.|:         ..|..|...| 
Mouse   264 ---CGQPCPEGRFGKNCSQECQCHNGGTCDAATGQCHCSPGYTGERCQDECPVGSYGVRCAEAC- 324

  Fly   249 TCPENGLCLS-PGVCVCKPGYVMRNDLCQPH----------CEK---CS-DNAHCVAP--NQCEC 296
            .|...|.|.. .|.|:|:.|:  ..:||:..          |:|   |. ||.|...|  .:|.|
Mouse   325 RCVNGGKCYHVSGTCLCEAGF--SGELCEARLCPEGLYGIKCDKRCPCHLDNTHSCHPMSGECGC 387

  Fly   297 FPGYESSGADKKCVP-----------KCSKG-----------CTNGF----CFAPETCVCSIGYQ 335
            .||:.....::.|.|           .|..|           |..||    |..|    |.:| :
Mouse   388 KPGWSGLYCNETCSPGFYGEACQQICSCQNGADCDSVTGRCACAPGFKGTDCSTP----CPLG-R 447

  Fly   336 MGPN----------QVCEP--------------KCSLNCVHG----------KC-------TSPE 359
            .|.|          .||.|              .||:.|..|          :|       |...
Mouse   448 YGINCSSRCGCKNDAVCSPVDGSCICKAGWHGVDCSIRCPSGTWGFGCNLTCQCLNGGACNTLDG 512

  Fly   360 TCTCDPGYRFK-------------------DNSHHE-CDPI--------------CDSGCSNG-- 388
            ||||.||:|..                   |.||.: |.|.              |||.|:.|  
Mouse   513 TCTCAPGWRGAKCEFPCQDGTYGLNCAERCDCSHADGCHPTTGHCRCLPGWSGVHCDSVCAEGRW 577

  Fly   389 --HCVAPNFC--------------------------ICHDGYQ-----------LNSTNP---VT 411
              :|..|.:|                          ||..|:.           ::|:.|   :|
Mouse   578 GPNCSLPCYCKNGASCSPDDGICECAPGFRGTTCQRICSPGFYGHRCSQTCPQCVHSSGPCHHIT 642

  Fly   412 -----------SMCQPICKGCQFG-DCVAPNVCECNVGYENINGLCE-LQTTTDSYEYSTTTVEL 463
                       ::|..:|...:|| :|.  .||.|     ..||.|. :..:...|   ...:..
Mouse   643 GLCDCLPGFTGALCNEVCPSGRFGKNCA--GVCTC-----TNNGTCNPIDRSCQCY---PGWIGS 697

  Fly   464 QSSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDG--------MGTFNTAKCAKICVDPQDKPCLNL 520
            ..|...|......:.:...||..|..| ..|||        .|.:.|.:|.   :....|.|..:
Mouse   698 DCSQPCPPAHWGPNCIHTCNCHNGAFC-SAYDGECKCTPGWTGLYCTQRCP---LGFYGKDCALI 758

  Fly   521 DNCQ----CDLSSGQLV---------CQEDSDMDYSGENSRYVCHILPE---------------- 556
            ..||    ||..|||..         |::.......|...|.:|..|..                
Mouse   759 CQCQNGADCDHISGQCTCRTGFMGRHCEQKCPAGTYGYGCRQICDCLNNSTCDHITGTCYCSPGW 823

  Fly   557 QGARSEAEVRIPDRTGSSNKWMIIVGSC----------------AGMIIGVAATIIGIKY----- 600
            :|||.       |:.|     :||||:.                .|.|.|:...::.:.:     
Mouse   824 KGARC-------DQAG-----VIIVGNLNSLSRTSTALPADSYQIGAIAGIVVLVLVVLFLLALF 876

  Fly   601 --YRRSTSRR 608
              ||....|:
Mouse   877 IIYRHKQKRK 886

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Megf10NP_001001979.1 Necessary for interaction with AP2M1, self-assembly and formation of the irregular, mosaic-like adhesion pattern. /evidence=ECO:0000250|UniProtKB:Q96KG7 1..857 208/889 (23%)
EMI 31..100 CDD:462204 26/72 (36%)
EGF_Lam 281..318 CDD:214543 7/36 (19%)
EGF_CA 542..587 CDD:473889 12/44 (27%)
Necessary for formation of large intracellular vacuoles. /evidence=ECO:0000250|UniProtKB:Q96KG7 945..1147
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1093..1147
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.