DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and stab2

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001277107.2 Gene:stab2 / 565194 ZFINID:ZDB-GENE-041210-336 Length:2543 Species:Danio rerio


Alignment Length:529 Identity:124/529 - (23%)
Similarity:171/529 - (32%) Gaps:207/529 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 CEGYEGSVENC----KPVCRQQC-------PQHGFCSSPNTC-------SCNAGYGGIDCHPVCP 131
            |.....|:.:|    |||..|:|       .:...|.|  ||       .|.:||.|.|| ..||
Zfish  1892 CRSCGSSIMDCPLGSKPVGEQECVLPDSVISRGSKCQS--TCKVVVWKPKCCSGYYGRDC-LACP 1953

  Fly   132 ----TVCGKNEFCDRP----GVCSCQNGYKRTSPSDNCL-----PVCEK-ECGHHSFCSE----P 178
                :.|..:..||..    |.|:|..|:...: .::||     |.|.. .|..|..|.|    .
Zfish  1954 GGPQSPCSNHGKCDEDHLGNGTCTCDTGFTGVA-CESCLDGHFGPDCNACNCTEHGSCDEGLQGT 2017

  Fly   179 GKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCECENGYAGDDGGTNC 243
            |.|.||.|:                    ..|                  :|||..|  ||    
Zfish  2018 GSCFCEEGW--------------------TGP------------------QCENKLA--DG---- 2038

  Fly   244 RPVCS-TCPENGLCLSPGVCVCKPGY-------VMRNDLCQPHCEKCSDNAHCVAPNQ---CECF 297
             |||: .|.|.|:|:....|||||.|       .:.| :|:.....||.:|.|....:   |.|.
Zfish  2039 -PVCNPACHEKGVCMENNTCVCKPFYEGDGITCTVAN-MCKYWNGGCSKDAKCSQKGEKVSCACL 2101

  Fly   298 PGYESSGADKKCVP--KCSKGCTNGFCFAPETCV----------CSIGYQMGPNQVCEPK----- 345
            .|:  ||....|.|  .|..| .||.|....||.          |...| :|....||.|     
Zfish  2102 QGF--SGDGFVCTPIDPCVDG-ENGGCHEHATCTMTGPGKRKCECKDSY-VGDGIDCEAKVLPVN 2162

  Fly   346 -CSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFCICHDGYQLNSTNP 409
             |.::  :|:|.|...||         :.|||     |......|..:.|     ..|:||.|  
Zfish  2163 RCLVD--NGQCHSDAQCT---------DLHHE-----DKTLGVFHYRSTN-----GTYKLNYT-- 2204

  Fly   410 VTSMCQPICKGCQFGDCVAPNVCECNVGYENINGLCELQTTTDSYEYSTTTVELQSSTVDPQLQT 474
               |.|..||..                                           .||:...:|.
Zfish  2205 ---MAQEACKEA-------------------------------------------GSTIATYMQL 2223

  Fly   475 S-TSEVPHSNCTAGCMCWIEYDGMG---TFNTAKCAKICV------------DPQDKPCLNLDNC 523
            | ..:..:|.||||   |::...:.   :|::.:|....|            :..|..|..:.:.
Zfish  2224 SYAQQAGYSLCTAG---WLDKARVAYPMSFSSPRCGSGHVGIVDYGVRNNLSETWDTFCYRVKDV 2285

  Fly   524 QCDLSSGQL 532
            ||...:|.:
Zfish  2286 QCKCKTGYI 2294

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