DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Dkk4

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001102802.1 Gene:Dkk4 / 502097 RGDID:1563172 Length:221 Species:Rattus norvegicus


Alignment Length:227 Identity:46/227 - (20%)
Similarity:67/227 - (29%) Gaps:74/227 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 CSPICP--------------KDCGQNSRCVRPGVCE----C-----ENGYAGDDGGTNCRPVCST 249
            |||:..              :..|:.|:||....|.    |     |..:.     ..||.|...
  Rat    13 CSPLGALVLDFNNIKSSSDVQGSGKGSQCVSDKDCNVGKFCFALHDERSFC-----ATCRRVRRR 72

  Fly   250 CPENGLCLSPGVCVCKPGYVMRNDLC------QPHCEKCSDNAHCVAPNQCECFPGYESSGADKK 308
            |..:.:|....|||        ||:|      :|..::.:|............:|..|:....|.
  Rat    73 CQRSAMCCPGTVCV--------NDVCTAVENTRPVMDRNTDGQDGTYAEGTTKWPAEENRPQGKP 129

  Fly   309 CVPK--CSKGCTNGFCFAPETCVCSIGYQMGP---------NQVCEP------KCSLNCVHGKCT 356
            ...|  .:||.....|.....|        ||         .::|:|      .||.........
  Rat   130 STKKSQSNKGQEGESCLRTSDC--------GPGLCCARHFWTKICKPVLLEGQVCSRRGHKDTAQ 186

  Fly   357 SPE---TCTCDPGYRFKD----NSHHECDPIC 381
            :||   .|.|.||...:.    |..|....:|
  Rat   187 APEIFQRCDCGPGLSCRSQVTGNRQHTRLRVC 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Dkk4NP_001102802.1 Dkk4_Cys1 37..91 CDD:438007 16/66 (24%)
Dkk4_Cys2 128..221 CDD:438001 21/99 (21%)

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