DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and NimC3

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_524928.2 Gene:NimC3 / 48772 FlyBaseID:FBgn0001967 Length:224 Species:Drosophila melanogaster


Alignment Length:198 Identity:55/198 - (27%)
Similarity:80/198 - (40%) Gaps:44/198 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLHFVCLSLSFGTSFAILRHGLNDCSHPESVPYNRKVLKSKLV---------PFQQYSYFHGWVT 62
            ::|.|.:|     |.||..   ..|....||.|...|.|:::.         |....||      
  Fly    16 TIHLVEVS-----SLAITN---GHCQKNISVKYQVPVAKTRMAGAGPPNASHPIDLDSY------ 66

  Fly    63 KYRHQYVYEDETAYRTVMRPSCCEGYEGSVEN-CKPVCRQQCPQHGFCSSPNTCSCNAGY----- 121
                 .|||:...:..:.  .||.||...:.. |:|||::.||.|.:|:.|:.|.|..||     
  Fly    67 -----VVYEERVRWDNIQ--VCCPGYRTILFGFCEPVCQEACPAHSYCAEPDRCHCQRGYEPSHH 124

  Fly   122 ----GGIDCHPVCPTVCGKNEFCDRPGVCSCQNGYKRTSPSDNCLPVCEK-ECGHHS-FCSEPGK 180
                ..:.|.|||...|.::..|.....|.|..|:|..|...:....||: :|||.. |  :||:
  Fly   125 HTTGHQLICRPVCQGGCPEHSHCVAHNECECWPGFKDASSWFSLSLRCERVQCGHEQRF--DPGR 187

  Fly   181 CEC 183
            ..|
  Fly   188 RAC 190

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