DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and drpr

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001261276.1 Gene:drpr / 38218 FlyBaseID:FBgn0027594 Length:1042 Species:Drosophila melanogaster


Alignment Length:656 Identity:178/656 - (27%)
Similarity:232/656 - (35%) Gaps:211/656 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GLNDCSHPESVPYNRKVLKSKLVPFQQYSYFHGWVTKY---------RHQYVYEDETAYRTVMRP 82
            |.|.|...|.  ||..|:.::|..||:..  ..|...:         :|:.|.:.:|..:..:..
  Fly    25 GPNICKRREL--YNVDVVYTELQSFQERG--STWCVTFPPRCSTYRIKHRVVNKTKTIAKNRIVR 85

  Fly    83 SCCEGYEGSVENCKPVCRQQCPQHGFCSSPNTCSCNAGYGGIDCHPVCP-----------TVCGK 136
            .||:||..|...|.|.|.:.| |||.|.||..|.|:.||||..|...||           ..|..
  Fly    86 DCCDGYIASAGECVPHCSEPC-QHGRCISPEKCKCDHGYGGPACDINCPPGWYGRNCSMQCDCLN 149

  Fly   137 NEFCDR-PGVCSCQNGYKRTSPSD---------NCLPVCEKECG---HHSFCSEPGKCECEPGYE 188
            |..|:. .|.|.|..||.....:|         ||...|..|.|   ||    ..|:|:|.||:.
  Fly   150 NAVCEPFSGDCECAKGYTGARCADICPEGFFGANCSEKCRCENGGKCHH----VSGECQCAPGFT 210

  Fly   189 KVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRP--GVCECENGYAGDDGGTNCRPVCS--- 248
            ........|||   .....|...||  |..:.:| :|  |.|.|..|:.||.....| ||.|   
  Fly   211 GPLCDMRCPDG---KHGAQCQQDCP--CQNDGKC-QPETGACMCNPGWTGDVCANKC-PVGSYGP 268

  Fly   249 TCPENGLCLS-------PGVCVCKPGYVMRNDLCQPHCE------------KCSDNAHCVAPN-Q 293
            .|.|:..|..       .|.|.|.|||  |.:.|...|:            .|:::|.|...| .
  Fly   269 GCQESCECYKGAPCHHITGQCECPPGY--RGERCFDECQLNTYGFNCSMTCDCANDAMCDRANGT 331

  Fly   294 CECFPGYESSGADKKCVPK----------CSKGCT-----NGFCFAPET--CVCSIGY------- 334
            |.|.||:  :||  ||..:          |::.|.     ...|. |||  |.||||:       
  Fly   332 CICNPGW--TGA--KCAERICEANKYGLDCNRTCECDMEHTDLCH-PETGNCQCSIGWSSAQCTR 391

  Fly   335 -----QMGPNQVCEPKCSLNCVHGKCTSP--ETCTCDPGYRFKDNSHHECDPICDSG-------- 384
                 :.|||  ||..|  ||.:|...||  .||.|.||:|     ...|:..|:.|        
  Fly   392 PCTFLRYGPN--CELTC--NCKNGAKCSPVNGTCLCAPGWR-----GPTCEESCEPGTFGQDCAL 447

  Fly   385 ---CSNGHCVAPNF--CICHDGYQLNSTNPVTSMCQPICKGCQFG-DCVAPNVCEC--NVGYENI 441
               |.||....|..  |:|..|::       ...|...|....|| ||.  .||:|  |......
  Fly   448 RCDCQNGAKCEPETGQCLCTAGWK-------NIKCDRPCDLNHFGQDCA--KVCDCHNNAACNPQ 503

  Fly   442 NGLCELQTTTDSYEYSTTTVELQSSTVDPQLQTSTSEVPHSNCTAGCMCWIEYDGMGTFNTAK-- 504
            ||.|                                     .|.||   |.........:|.|  
  Fly   504 NGSC-------------------------------------TCAAG---WTGERCERKCDTGKFG 528

  Fly   505 --CAKICVDPQDKPCLNLDNCQCDLSSGQLVCQED---------SDMDYSGENSRYVCHIL---- 554
              ||:.|      .|...::..||.::|:.||::|         ....|.|||...||..|    
  Fly   529 HDCAQKC------QCDFNNSLACDATNGRCVCKQDWGGVHCETNCRSGYYGENCDKVCRCLNNSS 587

  Fly   555 --PEQG 558
              |:.|
  Fly   588 CDPDSG 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
drprNP_001261276.1 EMI 26..92 CDD:462204 16/69 (23%)
EGF_CA 274..319 CDD:473889 10/46 (22%)
gliding_CglD <451..579 CDD:468178 40/182 (22%)
DSL 567..609 CDD:473190 9/27 (33%)

Return to query results.
Submit another query.