DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Ccbe1

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_848908.1 Gene:Ccbe1 / 320924 MGIID:2445053 Length:408 Species:Mus musculus


Alignment Length:212 Identity:54/212 - (25%)
Similarity:72/212 - (33%) Gaps:56/212 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 EKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNGFCFAPETCVCSIGYQMGPNQVCEP 344
            |.||:|......     :|..:|||....|.   .|.|..|:.|....|:.. .|.:.....||.
Mouse    46 EVCSENKITTTK-----YPCLKSSGELTTCF---RKKCCKGYKFVLGQCIPE-DYDICAQAPCEQ 101

  Fly   345 KCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECD-PICDSGCSNGHCVAPNFCICHDGYQLNSTN 408
            :|:.|  .|:.    .|||.||||:....|.:.: |.|   .....|...|              
Mouse   102 QCTDN--FGRV----LCTCYPGYRYDRERHQKRERPYC---LDIDECATSN-------------- 143

  Fly   409 PVTSMCQPICKGCQFGDCVAPNVCECNVGY--ENINGLCELQTTTDSYEYSTTTVELQSSTVDPQ 471
              |::|..||.     :.:....|||..||  |:....|   |..|.|...|...|         
Mouse   144 --TTLCAHICI-----NTMGSYHCECREGYILEDDGRTC---TRGDKYPNDTGHEE--------- 189

  Fly   472 LQTSTSEVPHSNCTAGC 488
              .|.:||....|.|.|
Mouse   190 --KSENEVKAGTCCATC 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Ccbe1NP_848908.1 EGF_CA 135..176 CDD:214542 13/64 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..408
Blue background indicates that the domain is not in the aligned region.

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