DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and NimA

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_609691.6 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster


Alignment Length:338 Identity:73/338 - (21%)
Similarity:110/338 - (32%) Gaps:126/338 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 ETAYRTVMRPS----------CCEGYEGSVEN----CKPVCRQQCPQHGFCSSPNTCSCNAGY-- 121
            :|..|.|||..          ||:||||::.:    |||:||..|.: |.|..|:.|||..||  
  Fly    91 KTEMREVMRVQKLNKTRTVRFCCQGYEGNLSDSQATCKPICRGGCGR-GSCVMPDICSCEEGYIG 154

  Fly   122 -----------GGIDCHPVCPTVCGKNEFCD-RPGVCSCQNGYKRTSPSDNCLPVCEKECGHHSF 174
                       .|:||..:|.  |.....|| :.|:|.|..|:..        ..||..|...::
  Fly   155 KHCTQRCDHDRWGLDCKNLCQ--CQNGAACDNKSGLCHCIAGWTG--------QFCELPCPQGTY 209

  Fly   175 ---CSEPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPG---------- 226
               |.:  .|:|:   ||                 .|:|       |...|::..          
  Fly   210 GIMCRK--ACDCD---EK-----------------PCNP-------QTGACIQQDQPLQLNVSHV 245

  Fly   227 VCECENGYAGDDGGTNCRPVCSTCPENGLCLSPGVCVCKPGYVMRNDLCQPHCEKCSDNAH---- 287
            :.|..|               ||..:.|:...|...|..|..::   :.||   ..::||.    
  Fly   246 IVETVN---------------STLEKMGIIPRPTTPVPLPEVIV---IKQP---TSNENAQHSPK 289

  Fly   288 -CVAPNQCECFPGYESSGADKKCVPKCSKGCTNGFCFAPETCVCSIGYQMGPNQVCEPKCSLNCV 351
             .|..:..:......::.|.....|:.....|||.....|.....:|                  
  Fly   290 IIVHQSSSDLLENLHTAAAAGVPTPEVIHVITNGITSPQEHLAGFVG------------------ 336

  Fly   352 HGKCTSPETCTCD 364
             |:..|.:|.|.|
  Fly   337 -GEANSSQTATAD 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
NimANP_609691.6 EMI 51..118 CDD:462204 9/26 (35%)

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