DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and dkk1b

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_571078.1 Gene:dkk1b / 30197 ZFINID:ZDB-GENE-990708-5 Length:241 Species:Danio rerio


Alignment Length:234 Identity:47/234 - (20%)
Similarity:67/234 - (28%) Gaps:91/234 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 NTCSCNAGYGGIDCHPVCPTVCGKNEFCDRPGVCSCQN-GYKRTSPSDNCLPVCEKECGHHSFCS 176
            |.....:|..| ..|||.|:          |.|....: .:...:|....:...::|||...||.
Zfish    29 NAIKVGSGAAG-SSHPVSPS----------PDVSPLDSLNFALDTPQQPLICESDEECGGEEFCF 82

  Fly   177 EPGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVC----ECENGYA-- 235
            :                          |.|.|.. |.|   :..||:|..:|    .|.||..  
Zfish    83 Q--------------------------SRGVCLQ-CKK---RRKRCIRDAMCCPGNHCSNGVCIP 117

  Fly   236 -----------------GDDGGTNCRPVCST--CPEN----GL----CLSPGVC----------- 262
                             ..:..|...|..||  .|:|    ||    ||....|           
Zfish   118 NDPDIIQQLGMEEFVSIAHENSTALMPKVSTQGSPQNQMLKGLEGENCLRSSDCAETLCCARHFW 182

  Fly   263 --VCKPGYVMRNDLCQPHCEKCSDNAHCVAPNQCECFPG 299
              :||| .:....:|..|..|.:......  .:|:|..|
Zfish   183 SKICKP-VLKEGQVCTKHKRKGTHGLEIF--QRCDCGEG 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
dkk1bNP_571078.1 Dkk_Cys1 6..116 CDD:471087 27/127 (21%)
Dkk1_Cys2 158..239 CDD:437998 14/64 (22%)

Return to query results.
Submit another query.