DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimC1 and Dkk2

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001099942.1 Gene:Dkk2 / 295445 RGDID:1308639 Length:259 Species:Rattus norvegicus


Alignment Length:259 Identity:56/259 - (21%)
Similarity:84/259 - (32%) Gaps:77/259 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 SKGCTNGFCFAPETCVCSIG--YQMGPNQVCEPKCSLNCVHGKCTSPE--TCTCDPGYRFKDNSH 374
            |.|...|..|.......|:|  |....::.||       |...|.||.  :..|....|.|...|
  Rat    54 SAGMNQGLAFGGSKKGKSLGQAYPCSSDKECE-------VGRYCHSPHQGSSACMVCRRKKKRCH 111

  Fly   375 HECDPICDSG--CSNGHCVAPNFCICHDGYQLNSTNPVTSMCQ----PICKGCQFGDCVAPNVCE 433
            .  |.:|..|  |:||.|:                 |||....    |...|.:..|....:...
  Rat   112 R--DGMCCPGTRCNNGICI-----------------PVTESILTPHIPALDGTRHRDRNHGHYSN 157

  Fly   434 CNVGYENINGLCELQTTTDSYEYSTTTVELQSSTVDPQLQTSTSEVPHSNCTAGCMC----WIEY 494
            .::|::|:.            ...:....::....||.|::       |:|..|..|    |   
  Rat   158 HDLGWQNLG------------RPHSKMPHIKGHEGDPCLRS-------SDCIDGFCCARHFW--- 200

  Fly   495 DGMGTFNTAKC------AKICVDPQDKPCLNLDNCQ-CDLSSGQLVCQEDSDMDYSGENSRYVC 551
                   |..|      .::|...:.|....|:..| ||.:.| |.|:...|..||.:...:||
  Rat   201 -------TKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKG-LSCKVWKDATYSSKARLHVC 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Dkk2NP_001099942.1 Dkk2_Cys1 74..128 CDD:438009 17/62 (27%)
Dkk2_Cys2 175..258 CDD:437999 24/100 (24%)

Return to query results.
Submit another query.