DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and Dkk1

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001099820.1 Gene:Dkk1 / 293897 RGDID:1307313 Length:270 Species:Rattus norvegicus


Alignment Length:292 Identity:65/292 - (22%)
Similarity:93/292 - (31%) Gaps:90/292 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CSHP--------ESVPYNRKVLKSKLVPFQQYSYFHGWVTKYRHQYVYEDETAYRTVMRPSCCEG 87
            ||.|        .||..|...:|:...|........|.........:||....|:|         
  Rat    22 CSLPPLGVSATLNSVLINSNAIKNLPPPLGGAGGQPGSAVSVAPGVLYEGGNKYQT--------- 77

  Fly    88 YEGSVENCKPV-CR--QQCPQHGFCSSPNTCSCNAGYGGIDCHPVCPTVCGKNEFCDRPGVCS-- 147
                ::|.:|. |.  ::|....:||||:..:  ||.||:.   :|.....:.:.|.|..:|.  
  Rat    78 ----LDNYQPYPCAEDEECGTDEYCSSPSRGA--AGVGGVQ---ICLACRKRRKRCMRHAMCCPG 133

  Fly   148 --CQNGYKRTSPSDNCLPVCEKECGHHSFCSEPGKCECEPG-YEKVGNGTVFPDGYKNNSNGNCS 209
              |:||.        |:|      ..||...   :.|.|.| .|.:||.....|||...:. ..|
  Rat   134 NYCKNGI--------CMP------SDHSHLP---RGEIEEGIIENLGNDHGAGDGYPRRTT-LTS 180

  Fly   210 PICPKDCGQNSRCVRPGVCECENGYAGDDGGTNCRPVCSTCPENGLCLSPGVC-------VCKPG 267
            .|......:.|.|:|...|                       ..|||     |       :||| 
  Rat   181 KIYHTKGQEGSVCLRSSDC-----------------------ATGLC-----CARHFWSKICKP- 216

  Fly   268 YVMRNDLCQPHCEKCSDNAHCVAPNQCECFPG 299
            .:....:|..|..|.|......  .:|.|..|
  Rat   217 VLKEGQVCTKHRRKGSHGLEIF--QRCYCGEG 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
Dkk1NP_001099820.1 Dkk1_N_Cys1 19..142 CDD:438010 32/145 (22%)
Dkk1_Cys2 186..268 CDD:437998 18/92 (20%)

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