DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and NimB2

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster


Alignment Length:411 Identity:121/411 - (29%)
Similarity:157/411 - (38%) Gaps:135/411 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 YSYFHGWVTKYRHQYVYEDETA---------------YRTVMRPS-------------------- 83
            |.::...||...|:....||||               |:.|...|                    
  Fly    99 YGHYVQPVTPPAHRVQVLDETALFINKTRSAMASGVCYKEVPTASLLRNSRDQFVGNGTTPDMSR 163

  Fly    84 ---CCEGYEGS---VENCKPVCRQQCPQHGFCSSPNTCSCNAGY-----GGIDCHPVCPTVCGKN 137
               ||:|||.:   ...|:|:|...| ::|.|::||||.|..|:     |  .|...||..|| |
  Fly   164 IQVCCDGYERNPHIYRRCEPICADDC-RNGICTAPNTCVCIPGHVRTAEG--KCISTCPLGCG-N 224

  Fly   138 EFCDRPGVCSCQNGYKRTSPSDNCLPVCEKECGHHSFCSEPGKCECEPGYEKVGNGTVFPDGYKN 202
            ..||....|.|:.||       :..|...|.|       :|   ||:||                
  Fly   225 GVCDERNECKCREGY-------SLEPETRKYC-------QP---ECKPG---------------- 256

  Fly   203 NSNGNCSPICPKDCGQNSRCVRPGVCECENGY-AGDDGGTNCRPVCSTCPENGLCLSPGVCVCKP 266
                 ||         ..|||.|..|.|.:|| ...||  :|.|||.:| |||.|.:||.|.|..
  Fly   257 -----CS---------FGRCVAPNKCACLDGYRLAADG--SCEPVCDSC-ENGKCTAPGHCNCNA 304

  Fly   267 GYVMRNDLCQPHCEKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNGFCFAPETCVCS 331
            ||:.....|:|.|.....|..|:.|:.|||..|:|......:|:|||...|.||.|         
  Fly   305 GYLKLQGRCEPICSIPCKNGRCIGPDICECASGFEWDRKSAECLPKCDLPCLNGVC--------- 360

  Fly   332 IGYQMGPNQVCEPKCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFC 396
                :|.||                    |.|..||...::..:.|.|.|..||.||:|.|||||
  Fly   361 ----VGNNQ--------------------CDCKTGYVRDEHQRNICQPHCPQGCQNGYCSAPNFC 401

  Fly   397 ICHDGYQLNSTNPVTSMCQPI 417
            ||..|: :.|.......||.:
  Fly   402 ICRPGF-IKSGIKGRQTCQAV 421

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