DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and dsl-5

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_502191.1 Gene:dsl-5 / 186492 WormBaseID:WBGene00001107 Length:302 Species:Caenorhabditis elegans


Alignment Length:196 Identity:51/196 - (26%)
Similarity:63/196 - (32%) Gaps:58/196 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 CNAGYGGIDCHPVC----PTVCGKNEFCDRPGVCSCQNGYKRTSPSDNCLPVCEKECGHHSFCSE 177
            ||..:.|..|...|    .|..||:  |:..|..||.||...:.        |||       ...
 Worm   138 CNKNWFGEKCETFCDENKATNSGKH--CNFQGKPSCLNGLTGSK--------CEK-------LIV 185

  Fly   178 PGKCECEPGYEKVGNGTVFPDGYKNNSNGNCSPICPKDCGQNSRCVRPGVCE-------CENGYA 235
            |..|.||       ||.|..|       .|..|||  :|   |:..|...||       ..:.|.
 Worm   186 PKLCNCE-------NGGVCID-------SNPKPIC--EC---SKAYRGEKCEKKHISASLSSHYK 231

  Fly   236 GDDGG---TNCRPVCSTCPENGLCLSPGVCVCKPGYVMRNDLCQPHCEKCSDNAHCVAPNQCECF 297
            ||...   |..:.:.|...||.|.   .:...:....:.|.|     ...||......||..|.|
 Worm   232 GDFWNFRMTFWQLIFSNLVENELA---EISKSEAWETINNLL-----GNVSDTPFANRPNNTETF 288

  Fly   298 P 298
            |
 Worm   289 P 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
dsl-5NP_502191.1 DSL 138..182 CDD:460202 15/53 (28%)

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