DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimC1 and dkk3b

DIOPT Version :10

Sequence 1:NP_001260453.1 Gene:NimC1 / 34816 FlyBaseID:FBgn0259896 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001083014.1 Gene:dkk3b / 100038765 ZFINID:ZDB-GENE-061207-74 Length:283 Species:Danio rerio


Alignment Length:241 Identity:50/241 - (20%)
Similarity:65/241 - (26%) Gaps:118/241 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 EKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCSKGCTNGFCFAPETCVCSIGYQMGPNQVCEP 344
            |.|.|.:.|:          ||.  ...|||| |.  .||..|.....| |  |.|:        
Zfish   141 EDCGDGSFCL----------YEI--VTSKCVP-CQ--TTNMECTKDVEC-C--GDQL-------- 179

  Fly   345 KCSLNCVHGKCTSPETCTCDPGYRFKDNSHHECDPICDSGCSNGHCVAPNFCICHDGYQLNSTNP 409
                 ||.|.|...:|         |..|...|..  .:.||..||     |..|          
Zfish   180 -----CVWGVCAQNKT---------KGQSGTICQN--QNDCSPQHC-----CAFH---------- 213

  Fly   410 VTSMCQPICK-------GCQFGDCVAPNVCECNVGYENINGLCELQTTTDSYEYSTTTVELQSST 467
             .::..|:|:       ||:                ...|.|.|:....|               
Zfish   214 -KALLFPVCRPKPQEGQGCE----------------REGNQLMEVLLWED--------------- 246

  Fly   468 VDPQLQTSTSEVP--HSNCTAGCMCWIEYDGMGTFNTAKCAKICVD 511
                      |.|  |..|.||.:|          ...:.:.:|||
Zfish   247 ----------EGPREHCPCAAGLLC----------QQIQKSSVCVD 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimC1NP_001260453.1 None
dkk3bNP_001083014.1 Dkk3_N_Cys1 36..186 CDD:438008 21/75 (28%)
Dkk3_Cys2 188..271 CDD:438000 25/160 (16%)

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