DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9014 and Rnf41

DIOPT Version :10

Sequence 1:NP_609668.2 Gene:CG9014 / 34777 FlyBaseID:FBgn0028847 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_080535.2 Gene:Rnf41 / 67588 MGIID:1914838 Length:317 Species:Mus musculus


Alignment Length:321 Identity:141/321 - (43%)
Similarity:214/321 - (66%) Gaps:4/321 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFDLNCIVGHVDEELICPICTDVLEEPVQSSECEHAFCRACIDKWMIQKQICPVDRSGLLTSHL 65
            ||:|:....|.|||:||||||:.|||||||:..||||||.|||.:|..|:|.||||||.:..:||
Mouse     1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHCEHAFCNACITQWFSQQQTCPVDRSVVTVAHL 65

  Fly    66 VPVSRLMRNMLSRLKIKCTFSQSGCAQMLALEEFRTHVAACEHNPKVVVECSKGCGMKVPKDEMS 130
            .||.|:||||||:|:|.|..:..||:.::.|:...:|::.||||||..|.|.:|||:::||||:.
Mouse    66 RPVPRIMRNMLSKLQIACDNAVFGCSAVVRLDNLMSHLSDCEHNPKRPVTCEQGCGLEMPKDELP 130

  Fly   131 RHNCVFELRELVEKLAKEVSDLKQKQSDMEEQSSSQRREMELFQYYIAALRSTNPMLRNIGEQLD 195
            .|||:..||.:|::....:::|::..::.:.|.:.|:|:::|.:.|:.|:||.||.|:|:.|.::
Mouse   131 NHNCIKHLRSVVQQQQSRIAELEKTSAEHKHQLAEQKRDIQLLKAYMRAIRSVNPNLQNLEETIE 195

  Fly   196 RFSLMQWGHGLPLANIHTWGSLISTPDNPMHLMVRDVLRESGCPMHMLNMLVERCHEDRWPEGLM 260
            ...:::|.:.|..|.:..||.:|||||..:..:::..|.|||||..::|.|:|..||..||:||.
Mouse   196 YNEILEWVNSLQPARVTRWGGMISTPDAVLQAVIKRSLVESGCPASIVNELIENAHERSWPQGLA 260

  Fly   261 TLDDRRENQHLMSRYVTRLVPGLVIGKPCVVVLGGENTHMPENLRPILGLVMIFVDGVNEV 321
            ||:.|:.|:.....||.:.:|    ||..|||:..||.||.:::....||||||..||.|:
Mouse   261 TLETRQMNRRYYENYVAKRIP----GKQAVVVMACENQHMGDDMVQEPGLVMIFAHGVEEI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9014NP_609668.2 RING_Ubox 15..57 CDD:473075 28/41 (68%)
USP8_interact 137..319 CDD:430333 65/181 (36%)
Rnf41NP_080535.2 mRING-HC-C3HC3D_Nrdp1 15..57 CDD:438296 28/41 (68%)
USP8_interact 137..315 CDD:430333 65/181 (36%)

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