DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hacd2 and ptges3l

DIOPT Version :9

Sequence 1:NP_609655.2 Gene:Hacd2 / 34762 FlyBaseID:FBgn0032524 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001313640.1 Gene:ptges3l / 566751 ZFINID:ZDB-GENE-121214-210 Length:155 Species:Danio rerio


Alignment Length:129 Identity:43/129 - (33%)
Similarity:60/129 - (46%) Gaps:24/129 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LKVDLKDAKGAIADFSPVSVNFSANGHGARGVNAYKFELHFYALIDDENATFVVSDNKIELQIRK 83
            ::||::|.| .|.....|..|           |.|. |:.||..:...::...|.|..|.:.|||
Zfish    36 VQVDVQDKK-IILSCKDVDDN-----------NIYN-EIEFYDRVLKADSREKVHDRTINVLIRK 87

  Fly    84 L-EPEWWPRLVATPQKPHWLKIDFDRWRTEDDVEVEEKPRDVRQDYEKEYADLQKRELGYIKEK 146
            : |...||||.....||.||.:|||.||   |.|.||:  :...:|| :|.|:    |..:|.|
Zfish    88 VKENVAWPRLQKDTAKPAWLLVDFDNWR---DWEHEEE--EGMAEYE-QYVDM----LNDVKNK 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hacd2NP_609655.2 p23_hB-ind1_like 6..114 CDD:107222 32/95 (34%)
PTPLA 197..357 CDD:282269
ptges3lNP_001313640.1 alpha-crystallin-Hsps_p23-like 12..117 CDD:294116 32/96 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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