DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Hacd2 and hacd2

DIOPT Version :9

Sequence 1:	NP_609655.2	Gene:	Hacd2 / 34762	FlyBaseID:	FBgn0032524	Length:	371	Species:	Drosophila melanogaster
Sequence 2:	NP_001135628.1	Gene:	hacd2 / 100216187	XenbaseID:	XB-GENE-5998532	Length:	241	Species:	Xenopus tropicalis

Alignment Length:	203	Identity:	60/203 - (29%)
Similarity:	101/203 - (49%)	Gaps:	4/203 - (1%)

- Green bases have known domain annotations that are detailed below.

  Fly   151 YMIFYNLAMFVGYLYIMVVMGVLYYRDGVDSIGKTYANVGNAFKFIQLLQYLEVMHPMFGYTKGS 215
            |::.||:.|..|:|.|.|.:...|...|  |....|.::....||.|....||:.|...|....|
Frog    30 YLVIYNVVMTAGWLVIAVGLVRTYLTKG--SYHNLYYSIERPLKFFQTGALLEIGHCAVGIVPSS 92

  Fly   216 PVVPFFQVSGRNFILFLMIDMEPRMYAKPVVFYVFIIWSLVELVRYPYYLAQLLGREVGLLTWLR 280
            .|:..|||..|.|:.:.:......:..:..|....:.|::.|::||.:|...||.....::.|.|
Frog    93 VVLTAFQVMSRVFLTWAVTHSVREVQNEDSVLLFVVAWTITEIIRYSFYTFSLLNHLPYIIKWAR 157

  Fly   281 YTIWIPLYPMGILCEGIIVLRNIPYIEETKRFTVEMPNPWNITFDMVLFLKIYLM--LLIIPGSY 343
            ||::|.|||||:..|.:.:...:|.:::|..:::.:||.:|.:||...||.:.:|  :.|.|..|
Frog   158 YTLFIVLYPMGVTGELLTIYAALPTVKKTGLYSISLPNKYNFSFDYYTFLILVMMSYIPIFPQLY 222

  Fly   344 LVMSHMAK 351
            ..|.|..:
Frog   223 FHMFHQRR 230

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Hacd2	NP_609655.2	p23_hB-ind1_like	6..114	CDD:107222
Hacd2	NP_609655.2	PTPLA	197..357	CDD:282269	46/157 (29%)
hacd2	NP_001135628.1	PTPLA	74..233	CDD:367918	46/157 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1458293at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.010