DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16957 and pgrmc1

DIOPT Version :10

Sequence 1:NP_609650.1 Gene:CG16957 / 34755 FlyBaseID:FBgn0032519 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001006842.1 Gene:pgrmc1 / 448590 XenbaseID:XB-GENE-6082492 Length:177 Species:Xenopus tropicalis


Alignment Length:165 Identity:61/165 - (36%)
Similarity:97/165 - (58%) Gaps:19/165 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 TPIDVTLLIMSIVVFLKLGFFARRLSREEPDFSDDNNQEVDLPPL-RKDFTVRELREYDGTRADG 88
            :|:::.||.:.:.:..|:      |..::|..:::|.::  ||.: |:|||..||:||||.: :.
 Frog    13 SPLNICLLCLCLYLLYKI------LRGDKPQTTENNEEQ--LPKMKRRDFTPAELKEYDGVQ-NP 68

  Fly    89 RILVAILFNIYDVSRSVHYYGRNGVNPNYAGRDISRILIN---SPEDLKDSEDFDDLSDLSRNQM 150
            |||:||...::||:|...:||..|....:||||.||.|..   ..|.|||:  :||||||:..|.
 Frog    69 RILMAISGKVFDVTRGKKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDT--YDDLSDLTATQR 131

  Fly   151 NTLREWEQRYKMKYPFVGKL----KEKLQINEEED 181
            .||.:||.::..||..||||    :|..:..::||
 Frog   132 ETLSDWEAQFTFKYHHVGKLLKDGEEPTEYTDDED 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16957NP_609650.1 Cyt-b5 74..>127 CDD:459698 24/52 (46%)
pgrmc1NP_001006842.1 Cyt-b5 55..118 CDD:459698 27/63 (43%)

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