DRSC/TRiP Functional Genomics Resources

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Protein Alignment DnaJ-H and ARL1

DIOPT Version :10

Sequence 1:NP_001260431.1 Gene:DnaJ-H / 34707 FlyBaseID:FBgn0032474 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_173822.2 Gene:ARL1 / 839024 AraportID:AT1G24120 Length:436 Species:Arabidopsis thaliana


Alignment Length:458 Identity:98/458 - (21%)
Similarity:166/458 - (36%) Gaps:164/458 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YDVLKVAPDATDEEIKKNYRKLAKEFHPDK---NPDAGDKFKEISFAYEVLSDPEKRRIYDRYGL 68
            |:||.|..::||:|||..|||||.::||||   :|.|.|.|||::|:|.:||||||||.:|..| 
plant    22 YEVLGVLRNSTDQEIKSAYRKLALKYHPDKTANDPVAADMFKEVTFSYNILSDPEKRRQFDSAG- 85

  Fly    69 KGLQEGAEGFSDASEFFAQWFPFDRVSSEGRGRRNGKVVVKVELTLEEIYVGGMKKKVEYNRQKL 133
                                  |:.|.:|.:           ||.|:...:|.:....       
plant    86 ----------------------FEAVEAESQ-----------ELELDLSSLGAVNTVF------- 110

  Fly   134 CSKCNGDGGPKEAHESCETCGGAGRAAAFTFMGLSPFDTTC----------------PTCDGRGF 182
                                     ||.|:.:|: |..|:.                |...|:..
plant   111 -------------------------AALFSKLGV-PIKTSVSATILEEALNGRVSVDPLVLGQAV 149

  Fly   183 TIRDDKKCSPCQGSGFVEQKMKRDLV--VERGAPHMLKVPF----ANEGHQM-------RGGEFG 234
            :.:.:|:|:........|:::...||  ||..:....|:.:    ||.|..:       |.|:..
plant   150 SKKVEKQCAHFYAVTISEEEVSAGLVCRVESSSKSKFKLLYFDQEANSGLSLALQEDSKRTGKIT 214

  Fly   235 D-----LIVVISQMEHPIFQRRHANLYMRDLEINITEALCGYSHC-------------------F 275
            .     |...:.:::|.|.....|    :|.|....:.|.|:..|                   |
plant   215 SAGMYFLGFPVYRLDHTINSMAQA----KDPETAFFKKLDGFQQCEVTELKAGTHVFAVYGDNFF 275

  Fly   276 KHLDGRNVCLRTYPGEVL-------QHNQIKMVRGSGMPVFNKATDSGDL---YMKFKVKFPDND 330
            |::        :|..:||       :...::.|...   :..|..:....   |.:..|:|.|..
plant   276 KNV--------SYTIQVLCAAAFTQEKEDLRSVEAQ---ILTKRAELAKFETEYREVLVQFTDMT 329

  Fly   331 FATAPQLAMLEDLLPPRQPI-----VIP-----KNAEEVQMTDYK------PQPRQQEDEDGQSS 379
            ...|.::..:::||..|..|     .||     .:...::.:.:|      |.|.:||:|:.:..
plant   330 SRYAQEMQSIDELLKQRNEIHSAYTTIPLMKRSSSKNRMRKSSFKKAAAKAPAPTEQEEEEEEEE 394

  Fly   380 HFE 382
            ..|
plant   395 EEE 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DnaJ-HNP_001260431.1 PTZ00037 1..386 CDD:240236 98/458 (21%)
ARL1NP_173822.2 PRK14284 20..>174 CDD:237658 54/218 (25%)
DnaJ 20..82 CDD:395170 34/59 (58%)
ClpA <293..>361 CDD:440308 13/70 (19%)

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