DRSC/TRiP Functional Genomics Resources

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Protein Alignment DnaJ-H and Dnajb4

DIOPT Version :10

Sequence 1:NP_001260431.1 Gene:DnaJ-H / 34707 FlyBaseID:FBgn0032474 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001013094.1 Gene:Dnajb4 / 295549 RGDID:1305826 Length:337 Species:Rattus norvegicus


Alignment Length:394 Identity:108/394 - (27%)
Similarity:172/394 - (43%) Gaps:119/394 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YDVLKVAPDATDEEIKKNYRKLAKEFHPDKN--PDAGDKFKEISFAYEVLSDPEKRRIYDRYGLK 69
            |.:|.:...||||:|||.|||.|.:||||||  |.|.:||||::.||||||||:||.|||::|.:
  Rat     6 YHILGIEKGATDEDIKKAYRKQALKFHPDKNKSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGEE 70

  Fly    70 GLQEGAEG------------FSDASEFFAQWF----PFD----------RVSSE----------- 97
            ||:.||.|            ..|....||.:|    ||:          |.|.|           
  Rat    71 GLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGANPFEIFFGRRMGGGRDSEEMEIDGDPFSAF 135

  Fly    98 ----------------GRGRRNGKVVVKVELTLEEIYVGGMKKKVEYNRQKLCSKCNGDGGPKEA 146
                            .|.:::..::.:::::||||| .|..|:::.:|::              
  Rat   136 GFSMNGYPRDRNSVGPSRLKQDPPIIHELKVSLEEIY-SGCTKRMKISRKR-------------- 185

  Fly   147 HESCETCGGAGRAAAFTFMGLSPFDTTCPTCDGRGFTIRDDKKCSPCQGSGFVEQKMKRDLVVER 211
                                |:|        |||.:. .:||..:               :.:::
  Rat   186 --------------------LNP--------DGRSYR-SEDKILT---------------IEIKK 206

  Fly   212 GAPHMLKVPFANEGHQMRGGEFGDLIVVISQMEHPIFQRRHANLYMRDLEINITEALCGYSHCFK 276
            |.....|:.|..||.:.......|::.:|...|||.|:|..:|: :...:|::.|||||.|....
  Rat   207 GWKEGTKITFPREGDETPNSIPADIVFIIKDKEHPKFKRDGSNI-VYTAKISLREALCGCSINVP 270

  Fly   277 HLDGRNVCLRTYPGEVLQHNQIKMVRGSGMPVFNKATDSGDLYMKFKVKFPDNDFATAPQLAMLE 341
            .:||||:.:..  .::::....:.:.|.|:|........|||.::|.|.||  |..:|....:|.
  Rat   271 TMDGRNIPMSV--TDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFDVSFP--DVISAASKEILR 331

  Fly   342 DLLP 345
            ..||
  Rat   332 KHLP 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DnaJ-HNP_001260431.1 PTZ00037 1..386 CDD:240236 108/394 (27%)
Dnajb4NP_001013094.1 DnaJ_bact 4..332 CDD:274090 106/389 (27%)

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