DRSC/TRiP Functional Genomics Resources

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Protein Alignment Yip1d1 and yipf4

DIOPT Version :10

Sequence 1:NP_609596.1 Gene:Yip1d1 / 34696 FlyBaseID:FBgn0032465 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_998056.1 Gene:yipf4 / 405827 ZFINID:ZDB-GENE-040426-2253 Length:237 Species:Danio rerio


Alignment Length:270 Identity:67/270 - (24%)
Similarity:110/270 - (40%) Gaps:46/270 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SQFGGPNDFYGSAPSADASYNFDMPE----FGQELNFQTFDNTQASVPPNYDASYAQPPSQGLGG 62
            |...|...|..|..:.:.|...|.|:    .|.|.|..|:..|...             .:|.|.
Zfish     4 SPTNGDFTFVSSTDAEELSGTIDAPDITLNMGPESNRDTYATTFLR-------------QRGYGW 55

  Fly    63 FYDPTAYTDTSYGQDKSGKSAAGGGAGNEFDDEPPLLEELGINPNHIFQKTLAVLNPL--RGTDQ 125
            ..:...                     .|.:|..||||||.|:...|:.|...||.|:  .|.::
Zfish    56 LLEVEE---------------------EESEDTKPLLEELDIDLKDIYYKIRCVLMPMPSLGFNR 99

  Fly   126 QILQDT-DMAGPLVFCLTLGGFLLLSGKVTFSYIYGIGVMGCIFFYCLLSLMVSRSQVTFGAVAS 189
            |:::|. |..|||...|......:.......|:|..|.:.|.:..:.|..::  ..:|::|.|..
Zfish   100 QVVRDNPDFWGPLAVVLLFSMISIYGQFRVVSWIITIWIFGSLTIFLLARVL--GGEVSYGQVLG 162

  Fly   190 VLGYCLLPMVVLSGINILITIQGTLGLIVSGISIFWCAISASKLFATAFSMDHQQLLIAYPCAVL 254
            |:||.|||::|::.:.::|.....:..::....:||.|.||:.|.........:.||| ||..:|
Zfish   163 VIGYSLLPLIVIAPLLLVIGGFEVVSTLIKLFGVFWAAYSAASLLVGDEFKTKKPLLI-YPIFLL 226

  Fly   255 YGGFALITIY 264
            |..|  :::|
Zfish   227 YIYF--LSLY 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Yip1d1NP_609596.1 YIP1 <95..264 CDD:481248 50/171 (29%)
yipf4NP_998056.1 YIP1 <69..230 CDD:481248 49/163 (30%)

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