DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PICK1 and pick1

DIOPT Version :10

Sequence 1:NP_001285881.1 Gene:PICK1 / 34677 FlyBaseID:FBgn0032447 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_001070804.1 Gene:pick1 / 768194 ZFINID:ZDB-GENE-061013-283 Length:406 Species:Danio rerio


Alignment Length:380 Identity:229/380 - (60%)
Similarity:284/380 - (74%) Gaps:3/380 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 YEL--DRLGMTVSTNAVVITKDQSNLIGISIGGGAPMCPCLYIVQIFDGTPAAREGSLQSGDELL 146
            |||  |:||:......|.:.||..|||||||||||..||||||||:||.|.||.:|:|.:|||:.
Zfish     7 YELEEDKLGIPTVPGTVTLKKDSQNLIGISIGGGAQFCPCLYIVQVFDNTAAALDGTLAAGDEIT 71

  Fly   147 AVNSVSVKGKTKVEVAKMIQTATDEVVIHYNKLHADPEQGKTLDIILKKLKHRIVDNLSSNTADT 211
            .||...||||||||||||||....||||.||||.|||:|||:|||:|||:|||:|:|:||.|||.
Zfish    72 GVNGKPVKGKTKVEVAKMIQAVQGEVVIQYNKLQADPKQGKSLDIVLKKVKHRLVENMSSGTADA 136

  Fly   212 LGLSRAILCNDSLVKRLEELEGTELMYKGLVEHARRMLKAYYDLLQTYKSFGDCFTQISVHEPQQ 276
            |||||||||||.|||||||||.|..:||||:||.:|:|:|:|:|.||:::|||.|:.|.|.|||.
Zfish   137 LGLSRAILCNDGLVKRLEELEKTAELYKGLMEHTKRLLRAFYELSQTHRAFGDVFSVIGVREPQA 201

  Fly   277 RASEAFRTFGEFHRTLEKDGLGIIKQIKPVLADLGTYLNKAIPDTKLTVRRYADAKFTYLSYCLK 341
            .|||||..|.|.||.:||.|:.::|.|||:|.||.|||:|||||||||:|:|.|.||.|||||||
Zfish   202 AASEAFVKFAEAHRNMEKFGIQLLKTIKPMLHDLNTYLHKAIPDTKLTIRKYLDVKFGYLSYCLK 266

  Fly   342 VKEMDDEEHGFAALQEPLYRVETGNYEYRLILRCRQDARSKFAKLRTDVLEKMELLECKHAMDLN 406
            ||||||||:...||.:|||||.||||||||:|||||:||::|||:|.|||||:|||:.||..|:.
Zfish   267 VKEMDDEEYSCIALGDPLYRVSTGNYEYRLVLRCRQEARARFAKMRKDVLEKIELLDQKHVQDIV 331

  Fly   407 KQLRSLLESLAELHRSLVDRLDSLPPLFPIEVDFKETDFQYKSSTLKPQELDDDE 461
            .||:..:..::..:......|.. ..:||||||...|...|...:|..::.|::|
Zfish   332 FQLQRFVSGMSHYYDDCYAVLKD-ADVFPIEVDLSRTMINYSGQSLTYEDEDEEE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PICK1NP_001285881.1 PDZ_PICK1-like 96..179 CDD:467205 54/82 (66%)
BAR_PICK1 221..436 CDD:153343 126/214 (59%)
pick1NP_001070804.1 PDZ_PICK1-like 21..104 CDD:467205 54/82 (66%)
BAR_PICK1 146..360 CDD:153343 126/214 (59%)

Return to query results.
Submit another query.