Protein Alignment nub and vvl

DIOPT Version :10

• Sequence 1: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: NP_001303384.1
• Gene: vvl / 38752
• FlyBaseID: FBgn0086680
• Length: 742
• Species: Drosophila melanogaster
• Alignment Length: 451
• Identity: 167/451 - (37%)
• Similarity: 202/451 - (44%)
• Gaps: 132/451 - (29%)

  Fly   530 PPM--ISPVLAPSGCGSTTPNSMAAAA------------AAAAAVASTMGSGISPLLALPGMSSP 580
            ||.  :...|...|..:::|.|.|.|.            |||||.|...         ||...||
  Fly     9 PPSGDLDMALGGGGYHTSSPRSAADAGEMKYMQHHHHHHAAAAAAAHHQ---------LPSSPSP 64

  Fly   581 QAQLAAAGLGMNNPLLTGS---LSPQDFAQFHQLLQQRQVALTQQFNSYMELLRSGSLGLAQDDP 642
            ..|....|||:.:....||   |.|..:.|.|.         |...                  |
  Fly    65 NGQGNGGGLGLGSGSGLGSWSALHPDPWMQTHH---------THHL------------------P 102

  Fly   643 ALTAQVAAAQFLMQSQLQALSQASQQLQALQKQQQRQV--------------DEPLQLNHKMT-- 691
            |..|..:||..:.|.    :|..|||.:..|.......              ..|||.:|.|.
  Fly   103 AAAAVASAADTVKQE----MSHLSQQTRIQQGMASPHAAWHAPHAGHYAPTGGSPLQYHHAMNGM 163

  Fly   692 -QQPR---SSTPHSIRSPIAIRSPASSPQQLHHHHHHPLQITPPSSAASLKLSGMLTPSTPTSGT 752
             ..|.   ::..|...:|:.......|| |||.|||
  Fly   164 LHHPAHAVAAAHHQSVAPLHHTLRGESP-QLHIHHH----------------------------- 198

  Fly   753 QMSQGTTTPQPKTVASAAAARAAGEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKL 817
             |..|...           |.:.||   |:|...::||.|||.||||||||||||.|||||:|.|
  Fly   199 -MGGGDRD-----------AISGGE---EDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTL 248

  Fly   818 YGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQATGGVFDPAALQATVSTPEIIGR 882
            |||.||||||.|||||.|||||||||||||||||::||.|..:...: |..|.|         ||
  Fly   249 YGNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPTSI-DKIAAQ---------GR 303

  Fly   883 RRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRINP 943
            :||||||||.:::||||:.|....||:::|||.|||.|.:||||||||||||||||||:.|
  Fly   304 KRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTP 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nub	NP_001097153.1	POU	791..855	CDD:197673	53/63 (84%)
		Homeodomain	884..940	CDD:459649	38/55 (69%)
vvl	NP_001303384.1	POU	212..286	CDD:197673	57/73 (78%)
		Homeodomain	305..361	CDD:459649	38/55 (69%)