Protein Alignment nub and Pou3f2

DIOPT Version :10

• Sequence 1: NP_001097153.1
• Gene: nub / 34669
• FlyBaseID: FBgn0085424
• Length: 961
• Species: Drosophila melanogaster
• Sequence 2: NP_742082.2
• Gene: Pou3f2 / 29588
• RGDID: 61946
• Length: 445
• Species: Rattus norvegicus
• Alignment Length: 417
• Identity: 159/417 - (38%)
• Similarity: 190/417 - (45%)
• Gaps: 127/417 - (30%)

  Fly   588 GLGMNNPLLTGSLSPQDFAQFHQLLQQRQVALTQQFNSYMELLRSGSLGLAQDDPALTAQVAAAQ 652
            |.|..:|..|..|...|.         :...:.||.....||...|:|
  Rat    86 GGGDGSPWSTSPLGQPDI---------KPSVVVQQGGRGDELHGPGAL----------------- 124

  Fly   653 FLMQSQLQALSQASQQLQALQKQQQRQVDEPLQLNHKMTQQPRSSTPHSIRSPIAIRSPASS--- 714
             ..|.|.|...|..||.|..|:|||:|...|..::|.....|         .|.|.||.|::
  Rat   125 -QQQHQQQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHP---------GPGAWRSAAAAAHL 179

  Fly   715 -----------------------------PQQLHHH------------------HHHPLQITPPS 732
                                         |..||||                  |.||.| .||
  Rat   180 PPSMGASNGGLLYSQPSFTVNGMLGAGGQPAGLHHHGLRDAHDEPHHADHHPHPHSHPHQ-QPP- 242

  Fly   733 SAASLKLSGMLTPSTPTSGTQMSQGTTTPQPKTVASAAAARAAGEP-SPEETTDLEELEQFAKTF 796
                        |..|..|.....|                |..:| |.|:|...::||||||.|
  Rat   243 ------------PPPPPQGPPGHPG----------------AHHDPHSDEDTPTSDDLEQFAKQF 279

  Fly   797 KQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQAT 861
            |||||||||||.|||||:|.||||.||||||.|||||.|||||||||||||.|||::||.:..:.
  Rat   280 KQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSP 344

  Fly   862 GGVFDPAALQATVSTPEIIGRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLADRLSMEKEV 926
            ..: |..|.|         ||:||||||||.:::||||..||...||:::|||.|||.|.:||||
  Rat   345 TSI-DKIAAQ---------GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEV 399

  Fly   927 VRVWFCNRRQKEKRINPSLDSPTGADD 953
            ||||||||||||||:.|...:..||:|
  Rat   400 VRVWFCNRRQKEKRMTPPGGTLPGAED 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
nub	NP_001097153.1	POU	791..855	CDD:197673	53/63 (84%)
		Homeodomain	884..940	CDD:459649	39/55 (71%)
Pou3f2	NP_742082.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	63..173		30/122 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	203..269		20/95 (21%)
		POU	264..338	CDD:197673	57/73 (78%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	336..361		10/34 (29%)
		Homeodomain	357..413	CDD:459649	39/55 (71%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	411..445		7/16 (44%)