Protein Alignment CG5421 and Atp6ap1

DIOPT Version :10

• Sequence 1: NP_609569.1
• Gene: CG5421 / 34661
• FlyBaseID: FBgn0032434
• Length: 426
• Species: Drosophila melanogaster
• Sequence 2: NP_113973.2
• Gene: Atp6ap1 / 83615
• RGDID: 620423
• Length: 463
• Species: Rattus norvegicus
• Alignment Length: 361
• Identity: 68/361 - (18%)
• Similarity: 120/361 - (33%)
• Gaps: 105/361 - (29%)

  Fly   104 RVAEKTGDIIW-HIPKISEMGSLEAEMELPCQKGEIHAFSFNDRNLLA-----HD----AAMAVA 158
            |...:...::| .:..::...::.||.::|.      ....:||:|.|     |:    :.|.::
  Rat    11 RTGTRWAPVLWLLLSLVAVAAAVAAEQQVPL------VLWSSDRDLWAPVADTHEGHITSDMQLS 69

  Fly   159 TYQ--------------FSDCPVVHVYTAYTEEDKALQRRKSQKTQHMSIKNKIDGQPSNSDTEV 209
            ||.              ..|...:..:|||..                ...||.|...||.:..:
  Rat    70 TYLDPALELGPRNVLLFLQDKLSIEDFTAYGG----------------VFGNKQDSAFSNLENAL 118

  Fly   210 ELQPHQISQSQAD-----NMTVLRNEMIVLTFRSILLAT-KEQRSVLS---------PFNRTEVM 259
            :|.|..:.....|     .:|....|.:..:...:.||| ||.:...|         |:..:..:
  Rat   119 DLAPSSLVLPAVDWYAISTLTTYLQEKLGASPLHVDLATLKELKLNASLPALLLIRLPYTASSGL 183

  Fly   260 LAQGREPLQVGLLNSHDIFGGIVMVLNTELGPLIVELI---PSQ------------GNWYLTRMI 309
            :|    |.:| |..:.::.|.::..|.:|..|....|.   ||:            |...|...:
  Rat   184 MA----PREV-LTGNDEVIGQVLSTLESEDVPYTAALTAVRPSRVARDVAMVAGGLGRQLLQTQV 243

  Fly   310 FMNNTHYPRD-------LYFYGFEFSLCCTDITVYSSEASRLSFFDFHLDIL------WQDKDNG 361
            .....|.|..       :.|:...||:      .|..|...|:...|.::.|      |.|....
  Rat   244 ASPAIHPPVSYNDTAPRILFWAQNFSV------AYKDEWKDLTSLTFGVENLNLTGSFWNDSFAM 302

  Fly   362 LDLQYEVKPCWNCSILMTPTMAQTIFVVLIIAAILW 397
            |.|.||  |.:..::.....:|...:.|   :|..|
  Rat   303 LSLTYE--PLFGATVTFKFILASRFYPV---SARYW 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5421	NP_609569.1	None
Atp6ap1	NP_113973.2	VAS1_LD	259..398	CDD:461752	19/86 (22%)
		Ac45-VOA1_TM	413..451	CDD:466669