DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5421 and Atp6ap1l

DIOPT Version :10

Sequence 1:NP_609569.1 Gene:CG5421 / 34661 FlyBaseID:FBgn0032434 Length:426 Species:Drosophila melanogaster
Sequence 2:XP_038958438.1 Gene:Atp6ap1l / 361875 RGDID:1564936 Length:344 Species:Rattus norvegicus


Alignment Length:124 Identity:24/124 - (19%)
Similarity:46/124 - (37%) Gaps:32/124 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 SQGNWY---LTRMIFMNNTH--------YPRDLYFYGFE--FSLCCTDITVYSSEAS------RL 344
            |..:|:   ...:||.|:..        |....|.|..:  .||...|..:..|.:.      .:
  Rat   174 SSQSWFSLHRVEIIFNNSVQATFNATGIYALSTYSYHCQRVSSLRRNDALLLLSSSDDVTSLWEV 238

  Fly   345 SFFDFHLDILWQDKDNGLDLQ-YEVKPCWNCSILMTPT----MAQTIFVVLIIAAILWM 398
            :|.||.:        .|..:: .:.....:||...:|.    :|.::.::|::|..|.|
  Rat   239 TFIDFQI--------QGFSIKGAQFSQARDCSSSFSPAVLIGLAMSLILLLVLAYALHM 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5421NP_609569.1 None
Atp6ap1lXP_038958438.1 VAS1_LD 102..248 CDD:461752 15/81 (19%)
Ac45-VOA1_TM 265..300 CDD:466669 6/25 (24%)

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