DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5421 and VhaAC45RP

DIOPT Version :10

Sequence 1:NP_609569.1 Gene:CG5421 / 34661 FlyBaseID:FBgn0032434 Length:426 Species:Drosophila melanogaster
Sequence 2:NP_001036775.1 Gene:VhaAC45RP / 318563 FlyBaseID:FBgn0051030 Length:423 Species:Drosophila melanogaster


Alignment Length:449 Identity:84/449 - (18%)
Similarity:156/449 - (34%) Gaps:130/449 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MYFIASLLLIVPIAFGSAPVTSSPPVLVWGVDTPKATSIFQPVTTAQFRKIIRNLQKNNMIVIYL 65
            :..:|:||.::   .||...:.|.|.:.||         ...|::.|.:.::             
  Fly     3 LILVATLLCLI---IGSCSASISGPFIFWG---------HSRVSSQQTQALV------------- 42

  Fly    66 ASELAAKDINCDLCFPYLTKIQPMNYYSQVEEPLNAVE-------RVAEKTGDIIW-HIPKIS-- 120
              |.:::::.....|   |:.:.:..:  |....|.:|       :...|:|  .| ::|:.|  
  Fly    43 --ESSSRELPLTQLF---TEAKAIVVF--VRNTTNRLEGTRYPKFQNLVKSG--AWTYLPQRSLA 98

  Fly   121 -EMGSLEAEMELPCQKGEIHAFSFNDRNLLAHDAAMAVATYQFSDCPVVHVYTAYTEEDKALQRR 184
             |...|.|.:|:....|  |....:...|||::.  ||.||...:  |:.:..:..||...|.:|
  Fly    99 AEPFGLNANIEVVSLSG--HGEEDDSEILLAYNE--AVNTYGRGE--VLGILGSREEEAHFLAKR 157

  Fly   185 KSQKTQHMSIKNKIDGQPSNSDTEVELQPHQISQSQADNMTVLRNEMIVLTFRSIL--------- 240
                          :..|...:.|.........:::|..:.|......||:....|         
  Fly   158 --------------EAAPGGEEEEKAKAAEGSEETEASFIYVAEGNKAVLSLNGPLELRVTNDTL 208

  Fly   241 --------LATKEQRSVLSPFNRTEVMLAQGREPLQVGLLNSHDIFGGIVMVLNTELGPLIVELI 297
                    :...:||             |:|...|.:..::|     |....|..:...:     
  Fly   209 KLEEHIKQITFDDQR-------------AKGYGRLSITFMHS-----GEKCTLRFKFSLI----- 250

  Fly   298 PSQGNWYLTRMIFMNNTHYPRDLYFYGFEFSLCCTDITV-YSSEASRLSFF-------------- 347
              :|:|.| |.:.:........|...|.|::|....:.. |...|..::|.              
  Fly   251 --RGSWTL-RNVEVEYRELKSVLVARGDEYTLPSAPLGFSYRCSAESVNFLNPARNETIQSLLLS 312

  Fly   348 DFHLDILWQDKDNGLDLQYEVKPCWNCSILMTPTMAQTIFVVLIIAAILWMGLAILLSI 406
            ||.:    |...||.....||..|  ...:..|.:| .:|||.::..||.:|::.:||:
  Fly   313 DFQV----QPWLNGRPEYGEVYDC--IGFVSAPILA-GLFVVTLLLGILGLGISAMLSM 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5421NP_609569.1 None
VhaAC45RPNP_001036775.1 Lamp <242..319 CDD:480752 15/88 (17%)

Return to query results.
Submit another query.